Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgb5Q91XX5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgb5Q91XX5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgb5Q91XX5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgb5Q91XX5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgb5Q91XX5 Gm9959-201ENSMUST00000068277 390 ntBASIC21.84■■□□□ 1.09
Pcdhgb5Q91XX5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgb5Q91XX5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhgb5Q91XX5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhgb5Q91XX5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhgb5Q91XX5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdhgb5Q91XX5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhgb5Q91XX5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhgb5Q91XX5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhgb5Q91XX5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.82■■□□□ 1.08
Pcdhgb5Q91XX5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhgb5Q91XX5 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgb5Q91XX5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgb5Q91XX5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhgb5Q91XX5 Gm15039-201ENSMUST00000118914 875 ntBASIC21.81■■□□□ 1.08
Pcdhgb5Q91XX5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Pcdhgb5Q91XX5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhgb5Q91XX5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgb5Q91XX5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgb5Q91XX5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhgb5Q91XX5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhgb5Q91XX5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgb5Q91XX5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhgb5Q91XX5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Pcdhgb5Q91XX5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhgb5Q91XX5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Pcdhgb5Q91XX5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgb5Q91XX5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhgb5Q91XX5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhgb5Q91XX5 Etf1-202ENSMUST00000180351 108 ntBASIC21.78■■□□□ 1.08
Pcdhgb5Q91XX5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Pcdhgb5Q91XX5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhgb5Q91XX5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb5Q91XX5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb5Q91XX5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb5Q91XX5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb5Q91XX5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhgb5Q91XX5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pcdhgb5Q91XX5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb5Q91XX5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb5Q91XX5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb5Q91XX5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.75■■□□□ 1.07
Pcdhgb5Q91XX5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhgb5Q91XX5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhgb5Q91XX5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb5Q91XX5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb5Q91XX5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb5Q91XX5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhgb5Q91XX5 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.74■■□□□ 1.07
Pcdhgb5Q91XX5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb5Q91XX5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.74■■□□□ 1.07
Pcdhgb5Q91XX5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhgb5Q91XX5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb5Q91XX5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhgb5Q91XX5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb5Q91XX5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhgb5Q91XX5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb5Q91XX5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhgb5Q91XX5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhgb5Q91XX5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhgb5Q91XX5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhgb5Q91XX5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Pcdhgb5Q91XX5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb5Q91XX5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb5Q91XX5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhgb5Q91XX5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pcdhgb5Q91XX5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhgb5Q91XX5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb5Q91XX5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb5Q91XX5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb5Q91XX5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhgb5Q91XX5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhgb5Q91XX5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb5Q91XX5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb5Q91XX5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb5Q91XX5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.7■■□□□ 1.06
Pcdhgb5Q91XX5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhgb5Q91XX5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.69■■□□□ 1.06
Pcdhgb5Q91XX5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.69■■□□□ 1.06
Pcdhgb5Q91XX5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb5Q91XX5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb5Q91XX5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb5Q91XX5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhgb5Q91XX5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhgb5Q91XX5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms