Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.53■■□□□ 1.04
Chrna3Q8R4G9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chrna3Q8R4G9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chrna3Q8R4G9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Chrna3Q8R4G9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Chrna3Q8R4G9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chrna3Q8R4G9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chrna3Q8R4G9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chrna3Q8R4G9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.52■■□□□ 1.04
Chrna3Q8R4G9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chrna3Q8R4G9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Chrna3Q8R4G9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chrna3Q8R4G9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Chrna3Q8R4G9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chrna3Q8R4G9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chrna3Q8R4G9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Chrna3Q8R4G9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chrna3Q8R4G9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chrna3Q8R4G9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Chrna3Q8R4G9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chrna3Q8R4G9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna3Q8R4G9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.49■■□□□ 1.03
Chrna3Q8R4G9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna3Q8R4G9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna3Q8R4G9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna3Q8R4G9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chrna3Q8R4G9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.49■■□□□ 1.03
Chrna3Q8R4G9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna3Q8R4G9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna3Q8R4G9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna3Q8R4G9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.48■■□□□ 1.03
Chrna3Q8R4G9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.48■■□□□ 1.03
Chrna3Q8R4G9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna3Q8R4G9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chrna3Q8R4G9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chrna3Q8R4G9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chrna3Q8R4G9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chrna3Q8R4G9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chrna3Q8R4G9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chrna3Q8R4G9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chrna3Q8R4G9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chrna3Q8R4G9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chrna3Q8R4G9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.45■■□□□ 1.02
Chrna3Q8R4G9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chrna3Q8R4G9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chrna3Q8R4G9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chrna3Q8R4G9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Chrna3Q8R4G9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chrna3Q8R4G9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chrna3Q8R4G9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chrna3Q8R4G9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chrna3Q8R4G9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chrna3Q8R4G9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chrna3Q8R4G9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chrna3Q8R4G9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chrna3Q8R4G9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.43■■□□□ 1.02
Chrna3Q8R4G9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chrna3Q8R4G9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Chrna3Q8R4G9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.42■■□□□ 1.02
Chrna3Q8R4G9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.42■■□□□ 1.02
Chrna3Q8R4G9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Chrna3Q8R4G9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chrna3Q8R4G9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Chrna3Q8R4G9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chrna3Q8R4G9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.41■■□□□ 1.02
Chrna3Q8R4G9 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.41■■□□□ 1.02
Chrna3Q8R4G9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Chrna3Q8R4G9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chrna3Q8R4G9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chrna3Q8R4G9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chrna3Q8R4G9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.4■■□□□ 1.02
Chrna3Q8R4G9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.4■■□□□ 1.02
Chrna3Q8R4G9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Chrna3Q8R4G9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Chrna3Q8R4G9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Chrna3Q8R4G9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Chrna3Q8R4G9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chrna3Q8R4G9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chrna3Q8R4G9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chrna3Q8R4G9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chrna3Q8R4G9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Chrna3Q8R4G9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.38■■□□□ 1.01
Chrna3Q8R4G9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chrna3Q8R4G9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Chrna3Q8R4G9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Chrna3Q8R4G9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Chrna3Q8R4G9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chrna3Q8R4G9 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.37■■□□□ 1.01
Chrna3Q8R4G9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.37■■□□□ 1.01
Chrna3Q8R4G9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chrna3Q8R4G9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chrna3Q8R4G9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Chrna3Q8R4G9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.36■■□□□ 1.01
Chrna3Q8R4G9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Chrna3Q8R4G9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chrna3Q8R4G9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Chrna3Q8R4G9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Chrna3Q8R4G9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Chrna3Q8R4G9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.36■■□□□ 1.01
Chrna3Q8R4G9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms