Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Cacnb1Q8R3Z5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.32■■□□□ 1.48
Cacnb1Q8R3Z5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cacnb1Q8R3Z5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.32■■□□□ 1.48
Cacnb1Q8R3Z5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Cacnb1Q8R3Z5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
Cacnb1Q8R3Z5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cacnb1Q8R3Z5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cacnb1Q8R3Z5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cacnb1Q8R3Z5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cacnb1Q8R3Z5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.31■■□□□ 1.48
Cacnb1Q8R3Z5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Cacnb1Q8R3Z5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cacnb1Q8R3Z5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Cacnb1Q8R3Z5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cacnb1Q8R3Z5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cacnb1Q8R3Z5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cacnb1Q8R3Z5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cacnb1Q8R3Z5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cacnb1Q8R3Z5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cacnb1Q8R3Z5 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cacnb1Q8R3Z5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Cacnb1Q8R3Z5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Cacnb1Q8R3Z5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cacnb1Q8R3Z5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Cacnb1Q8R3Z5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Cacnb1Q8R3Z5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cacnb1Q8R3Z5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.27■■□□□ 1.48
Cacnb1Q8R3Z5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cacnb1Q8R3Z5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cacnb1Q8R3Z5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cacnb1Q8R3Z5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.26■■□□□ 1.47
Cacnb1Q8R3Z5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cacnb1Q8R3Z5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Cacnb1Q8R3Z5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Cacnb1Q8R3Z5 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.25■■□□□ 1.47
Cacnb1Q8R3Z5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cacnb1Q8R3Z5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cacnb1Q8R3Z5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Cacnb1Q8R3Z5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cacnb1Q8R3Z5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Cacnb1Q8R3Z5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cacnb1Q8R3Z5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
Cacnb1Q8R3Z5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cacnb1Q8R3Z5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cacnb1Q8R3Z5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cacnb1Q8R3Z5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cacnb1Q8R3Z5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cacnb1Q8R3Z5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Cacnb1Q8R3Z5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cacnb1Q8R3Z5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Cacnb1Q8R3Z5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cacnb1Q8R3Z5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Cacnb1Q8R3Z5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cacnb1Q8R3Z5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cacnb1Q8R3Z5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cacnb1Q8R3Z5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cacnb1Q8R3Z5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cacnb1Q8R3Z5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
Cacnb1Q8R3Z5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cacnb1Q8R3Z5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.2■■□□□ 1.46
Cacnb1Q8R3Z5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cacnb1Q8R3Z5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.2■■□□□ 1.46
Cacnb1Q8R3Z5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cacnb1Q8R3Z5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cacnb1Q8R3Z5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cacnb1Q8R3Z5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.19■■□□□ 1.46
Cacnb1Q8R3Z5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cacnb1Q8R3Z5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cacnb1Q8R3Z5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cacnb1Q8R3Z5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cacnb1Q8R3Z5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cacnb1Q8R3Z5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.18■■□□□ 1.46
Cacnb1Q8R3Z5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cacnb1Q8R3Z5 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC24.18■■□□□ 1.46
Cacnb1Q8R3Z5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.18■■□□□ 1.46
Cacnb1Q8R3Z5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Cacnb1Q8R3Z5 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.17■■□□□ 1.46
Cacnb1Q8R3Z5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cacnb1Q8R3Z5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cacnb1Q8R3Z5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Cacnb1Q8R3Z5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cacnb1Q8R3Z5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Cacnb1Q8R3Z5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Cacnb1Q8R3Z5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Cacnb1Q8R3Z5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Cacnb1Q8R3Z5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cacnb1Q8R3Z5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.15■■□□□ 1.46
Cacnb1Q8R3Z5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Cacnb1Q8R3Z5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cacnb1Q8R3Z5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Cacnb1Q8R3Z5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cacnb1Q8R3Z5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cacnb1Q8R3Z5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cacnb1Q8R3Z5 Gm10420-201ENSMUST00000121713 882 ntBASIC24.14■■□□□ 1.45
Cacnb1Q8R3Z5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cacnb1Q8R3Z5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.14■■□□□ 1.45
Cacnb1Q8R3Z5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cacnb1Q8R3Z5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cacnb1Q8R3Z5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms