Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rtn4rl1Q8K0S5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
Rtn4rl1Q8K0S5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.65■■□□□ 1.22
Rtn4rl1Q8K0S5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.65■■□□□ 1.22
Rtn4rl1Q8K0S5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Rtn4rl1Q8K0S5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rtn4rl1Q8K0S5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rtn4rl1Q8K0S5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rtn4rl1Q8K0S5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.64■■□□□ 1.21
Rtn4rl1Q8K0S5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rtn4rl1Q8K0S5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rtn4rl1Q8K0S5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Rtn4rl1Q8K0S5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtn4rl1Q8K0S5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.63■■□□□ 1.21
Rtn4rl1Q8K0S5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Rtn4rl1Q8K0S5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtn4rl1Q8K0S5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rtn4rl1Q8K0S5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.62■■□□□ 1.21
Rtn4rl1Q8K0S5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn4rl1Q8K0S5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.62■■□□□ 1.21
Rtn4rl1Q8K0S5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn4rl1Q8K0S5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rtn4rl1Q8K0S5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Rtn4rl1Q8K0S5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Rtn4rl1Q8K0S5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.61■■□□□ 1.21
Rtn4rl1Q8K0S5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rtn4rl1Q8K0S5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn4rl1Q8K0S5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Rtn4rl1Q8K0S5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Rtn4rl1Q8K0S5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rtn4rl1Q8K0S5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Rtn4rl1Q8K0S5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rtn4rl1Q8K0S5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Rtn4rl1Q8K0S5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn4rl1Q8K0S5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn4rl1Q8K0S5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rtn4rl1Q8K0S5 Gm7417-201ENSMUST00000192950 473 ntBASIC22.57■■□□□ 1.2
Rtn4rl1Q8K0S5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.57■■□□□ 1.2
Rtn4rl1Q8K0S5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4rl1Q8K0S5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4rl1Q8K0S5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4rl1Q8K0S5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rtn4rl1Q8K0S5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn4rl1Q8K0S5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rtn4rl1Q8K0S5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4rl1Q8K0S5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Rtn4rl1Q8K0S5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.55■■□□□ 1.2
Rtn4rl1Q8K0S5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.55■■□□□ 1.2
Rtn4rl1Q8K0S5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rtn4rl1Q8K0S5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4rl1Q8K0S5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4rl1Q8K0S5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Rtn4rl1Q8K0S5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rtn4rl1Q8K0S5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.54■■□□□ 1.2
Rtn4rl1Q8K0S5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4rl1Q8K0S5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4rl1Q8K0S5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4rl1Q8K0S5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Rtn4rl1Q8K0S5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rtn4rl1Q8K0S5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn4rl1Q8K0S5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Rtn4rl1Q8K0S5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.52■■□□□ 1.2
Rtn4rl1Q8K0S5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Rtn4rl1Q8K0S5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn4rl1Q8K0S5 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.52■■□□□ 1.2
Rtn4rl1Q8K0S5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rtn4rl1Q8K0S5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn4rl1Q8K0S5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn4rl1Q8K0S5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn4rl1Q8K0S5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
Rtn4rl1Q8K0S5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rtn4rl1Q8K0S5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rtn4rl1Q8K0S5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rtn4rl1Q8K0S5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Rtn4rl1Q8K0S5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rtn4rl1Q8K0S5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rtn4rl1Q8K0S5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn4rl1Q8K0S5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn4rl1Q8K0S5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rtn4rl1Q8K0S5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.48■■□□□ 1.19
Rtn4rl1Q8K0S5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.48■■□□□ 1.19
Rtn4rl1Q8K0S5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rtn4rl1Q8K0S5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rtn4rl1Q8K0S5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.47■■□□□ 1.19
Rtn4rl1Q8K0S5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn4rl1Q8K0S5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn4rl1Q8K0S5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn4rl1Q8K0S5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn4rl1Q8K0S5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn4rl1Q8K0S5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
Rtn4rl1Q8K0S5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rtn4rl1Q8K0S5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rtn4rl1Q8K0S5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.46■■□□□ 1.19
Rtn4rl1Q8K0S5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.46■■□□□ 1.19
Rtn4rl1Q8K0S5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rtn4rl1Q8K0S5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rtn4rl1Q8K0S5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rtn4rl1Q8K0S5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms