Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hmgcs1Q8JZK9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hmgcs1Q8JZK9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.89■□□□□ 0.93
Hmgcs1Q8JZK9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgcs1Q8JZK9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgcs1Q8JZK9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgcs1Q8JZK9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Hmgcs1Q8JZK9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgcs1Q8JZK9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Hmgcs1Q8JZK9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgcs1Q8JZK9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgcs1Q8JZK9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Hmgcs1Q8JZK9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Hmgcs1Q8JZK9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.88■□□□□ 0.93
Hmgcs1Q8JZK9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgcs1Q8JZK9 Gm6311-201ENSMUST00000073790 878 ntBASIC20.88■□□□□ 0.93
Hmgcs1Q8JZK9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgcs1Q8JZK9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgcs1Q8JZK9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs1Q8JZK9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs1Q8JZK9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs1Q8JZK9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs1Q8JZK9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs1Q8JZK9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Hmgcs1Q8JZK9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.86■□□□□ 0.93
Hmgcs1Q8JZK9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgcs1Q8JZK9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgcs1Q8JZK9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgcs1Q8JZK9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs1Q8JZK9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs1Q8JZK9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.85■□□□□ 0.93
Hmgcs1Q8JZK9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs1Q8JZK9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs1Q8JZK9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs1Q8JZK9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgcs1Q8JZK9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.84■□□□□ 0.93
Hmgcs1Q8JZK9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgcs1Q8JZK9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgcs1Q8JZK9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgcs1Q8JZK9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.83■□□□□ 0.93
Hmgcs1Q8JZK9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgcs1Q8JZK9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgcs1Q8JZK9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgcs1Q8JZK9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Hmgcs1Q8JZK9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.83■□□□□ 0.92
Hmgcs1Q8JZK9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgcs1Q8JZK9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgcs1Q8JZK9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Hmgcs1Q8JZK9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgcs1Q8JZK9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgcs1Q8JZK9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Hmgcs1Q8JZK9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgcs1Q8JZK9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgcs1Q8JZK9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Hmgcs1Q8JZK9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgcs1Q8JZK9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Hmgcs1Q8JZK9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs1Q8JZK9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.81■□□□□ 0.92
Hmgcs1Q8JZK9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Hmgcs1Q8JZK9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs1Q8JZK9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs1Q8JZK9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs1Q8JZK9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs1Q8JZK9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs1Q8JZK9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgcs1Q8JZK9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hmgcs1Q8JZK9 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.8■□□□□ 0.92
Hmgcs1Q8JZK9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.8■□□□□ 0.92
Hmgcs1Q8JZK9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.8■□□□□ 0.92
Hmgcs1Q8JZK9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Hmgcs1Q8JZK9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgcs1Q8JZK9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgcs1Q8JZK9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgcs1Q8JZK9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgcs1Q8JZK9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgcs1Q8JZK9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.78■□□□□ 0.92
Hmgcs1Q8JZK9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs1Q8JZK9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs1Q8JZK9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs1Q8JZK9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs1Q8JZK9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs1Q8JZK9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Hmgcs1Q8JZK9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.78■□□□□ 0.92
Hmgcs1Q8JZK9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs1Q8JZK9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgcs1Q8JZK9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hmgcs1Q8JZK9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hmgcs1Q8JZK9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs1Q8JZK9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.76■□□□□ 0.91
Hmgcs1Q8JZK9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs1Q8JZK9 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.76■□□□□ 0.91
Hmgcs1Q8JZK9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs1Q8JZK9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgcs1Q8JZK9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs1Q8JZK9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs1Q8JZK9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs1Q8JZK9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs1Q8JZK9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.75■□□□□ 0.91
Hmgcs1Q8JZK9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgcs1Q8JZK9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms