Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm44428-201ENSMUST00000204474 874 ntBASIC22.88■■□□□ 1.25
Sh3rf3Q8C120 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3rf3Q8C120 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Sh3rf3Q8C120 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3rf3Q8C120 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3rf3Q8C120 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3rf3Q8C120 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf3Q8C120 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Sh3rf3Q8C120 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf3Q8C120 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf3Q8C120 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf3Q8C120 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sh3rf3Q8C120 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.83■■□□□ 1.25
Sh3rf3Q8C120 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Sh3rf3Q8C120 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Sh3rf3Q8C120 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Sh3rf3Q8C120 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Sh3rf3Q8C120 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Sh3rf3Q8C120 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Sh3rf3Q8C120 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.81■■□□□ 1.24
Sh3rf3Q8C120 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sh3rf3Q8C120 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Sh3rf3Q8C120 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.8■■□□□ 1.24
Sh3rf3Q8C120 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sh3rf3Q8C120 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sh3rf3Q8C120 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Sh3rf3Q8C120 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.78■■□□□ 1.24
Sh3rf3Q8C120 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf3Q8C120 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Sh3rf3Q8C120 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf3Q8C120 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf3Q8C120 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf3Q8C120 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh3rf3Q8C120 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.76■■□□□ 1.23
Sh3rf3Q8C120 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh3rf3Q8C120 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf3Q8C120 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf3Q8C120 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf3Q8C120 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf3Q8C120 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf3Q8C120 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Sh3rf3Q8C120 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf3Q8C120 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Sh3rf3Q8C120 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.73■■□□□ 1.23
Sh3rf3Q8C120 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.73■■□□□ 1.23
Sh3rf3Q8C120 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Mir6538-201ENSMUST00000183713 110 ntBASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sh3rf3Q8C120 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sh3rf3Q8C120 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sh3rf3Q8C120 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf3Q8C120 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf3Q8C120 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf3Q8C120 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf3Q8C120 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms