Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trub1Q8C0D0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Trub1Q8C0D0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trub1Q8C0D0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Trub1Q8C0D0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trub1Q8C0D0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
Trub1Q8C0D0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trub1Q8C0D0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trub1Q8C0D0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Trub1Q8C0D0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trub1Q8C0D0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trub1Q8C0D0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Trub1Q8C0D0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trub1Q8C0D0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trub1Q8C0D0 Gm22567-201ENSMUST00000175542 342 ntBASIC22.67■■□□□ 1.22
Trub1Q8C0D0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.67■■□□□ 1.22
Trub1Q8C0D0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Trub1Q8C0D0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Trub1Q8C0D0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.66■■□□□ 1.22
Trub1Q8C0D0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
Trub1Q8C0D0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trub1Q8C0D0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trub1Q8C0D0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trub1Q8C0D0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trub1Q8C0D0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Trub1Q8C0D0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Trub1Q8C0D0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trub1Q8C0D0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trub1Q8C0D0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trub1Q8C0D0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trub1Q8C0D0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trub1Q8C0D0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trub1Q8C0D0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trub1Q8C0D0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trub1Q8C0D0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trub1Q8C0D0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trub1Q8C0D0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Trub1Q8C0D0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.63■■□□□ 1.21
Trub1Q8C0D0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trub1Q8C0D0 Gm27502-201ENSMUST00000183495 199 ntBASIC22.63■■□□□ 1.21
Trub1Q8C0D0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.63■■□□□ 1.21
Trub1Q8C0D0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trub1Q8C0D0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trub1Q8C0D0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trub1Q8C0D0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trub1Q8C0D0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.61■■□□□ 1.21
Trub1Q8C0D0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.61■■□□□ 1.21
Trub1Q8C0D0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trub1Q8C0D0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Trub1Q8C0D0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trub1Q8C0D0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Trub1Q8C0D0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trub1Q8C0D0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.59■■□□□ 1.21
Trub1Q8C0D0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trub1Q8C0D0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trub1Q8C0D0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trub1Q8C0D0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trub1Q8C0D0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trub1Q8C0D0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.58■■□□□ 1.21
Trub1Q8C0D0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trub1Q8C0D0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trub1Q8C0D0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Trub1Q8C0D0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trub1Q8C0D0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trub1Q8C0D0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trub1Q8C0D0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trub1Q8C0D0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Trub1Q8C0D0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Trub1Q8C0D0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trub1Q8C0D0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.56■■□□□ 1.2
Trub1Q8C0D0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.56■■□□□ 1.2
Trub1Q8C0D0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trub1Q8C0D0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trub1Q8C0D0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trub1Q8C0D0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trub1Q8C0D0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.55■■□□□ 1.2
Trub1Q8C0D0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trub1Q8C0D0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trub1Q8C0D0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Trub1Q8C0D0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trub1Q8C0D0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.54■■□□□ 1.2
Trub1Q8C0D0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trub1Q8C0D0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trub1Q8C0D0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Trub1Q8C0D0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.53■■□□□ 1.2
Trub1Q8C0D0 Gm14523-201ENSMUST00000117260 558 ntBASIC22.53■■□□□ 1.2
Trub1Q8C0D0 Mir6538-201ENSMUST00000183713 110 ntBASIC22.53■■□□□ 1.2
Trub1Q8C0D0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trub1Q8C0D0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trub1Q8C0D0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms