Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdh20Q8BIZ0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pcdh20Q8BIZ0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdh20Q8BIZ0 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.24■□□□□ 0.99
Pcdh20Q8BIZ0 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.24■□□□□ 0.99
Pcdh20Q8BIZ0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh20Q8BIZ0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh20Q8BIZ0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh20Q8BIZ0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdh20Q8BIZ0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdh20Q8BIZ0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh20Q8BIZ0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh20Q8BIZ0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh20Q8BIZ0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh20Q8BIZ0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.23■□□□□ 0.99
Pcdh20Q8BIZ0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Pcdh20Q8BIZ0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh20Q8BIZ0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdh20Q8BIZ0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh20Q8BIZ0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh20Q8BIZ0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh20Q8BIZ0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pcdh20Q8BIZ0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh20Q8BIZ0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh20Q8BIZ0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh20Q8BIZ0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdh20Q8BIZ0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Terc-201ENSMUST00000082862 423 ntBASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdh20Q8BIZ0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdh20Q8BIZ0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdh20Q8BIZ0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdh20Q8BIZ0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.2■□□□□ 0.98
Pcdh20Q8BIZ0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh20Q8BIZ0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh20Q8BIZ0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh20Q8BIZ0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdh20Q8BIZ0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdh20Q8BIZ0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdh20Q8BIZ0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh20Q8BIZ0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh20Q8BIZ0 Cap2-205ENSMUST00000225824 1634 ntBASIC21.19■□□□□ 0.98
Pcdh20Q8BIZ0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh20Q8BIZ0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh20Q8BIZ0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdh20Q8BIZ0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.19■□□□□ 0.98
Pcdh20Q8BIZ0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh20Q8BIZ0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdh20Q8BIZ0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh20Q8BIZ0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdh20Q8BIZ0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdh20Q8BIZ0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh20Q8BIZ0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdh20Q8BIZ0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdh20Q8BIZ0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdh20Q8BIZ0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh20Q8BIZ0 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.16■□□□□ 0.98
Pcdh20Q8BIZ0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdh20Q8BIZ0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh20Q8BIZ0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh20Q8BIZ0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh20Q8BIZ0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh20Q8BIZ0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh20Q8BIZ0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh20Q8BIZ0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdh20Q8BIZ0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdh20Q8BIZ0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Pcdh20Q8BIZ0 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.15■□□□□ 0.98
Pcdh20Q8BIZ0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh20Q8BIZ0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdh20Q8BIZ0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh20Q8BIZ0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh20Q8BIZ0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdh20Q8BIZ0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdh20Q8BIZ0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh20Q8BIZ0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdh20Q8BIZ0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdh20Q8BIZ0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdh20Q8BIZ0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh20Q8BIZ0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdh20Q8BIZ0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdh20Q8BIZ0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh20Q8BIZ0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh20Q8BIZ0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.12■□□□□ 0.97
Pcdh20Q8BIZ0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdh20Q8BIZ0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh20Q8BIZ0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh20Q8BIZ0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdh20Q8BIZ0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdh20Q8BIZ0 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.12■□□□□ 0.97
Pcdh20Q8BIZ0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdh20Q8BIZ0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms