Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc5a7Q8BGY9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc5a7Q8BGY9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc5a7Q8BGY9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc5a7Q8BGY9 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.22■□□□□ 0.67
Slc5a7Q8BGY9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Slc5a7Q8BGY9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc5a7Q8BGY9 Gm37136-201ENSMUST00000194368 194 ntBASIC19.21■□□□□ 0.67
Slc5a7Q8BGY9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.21■□□□□ 0.67
Slc5a7Q8BGY9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc5a7Q8BGY9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc5a7Q8BGY9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc5a7Q8BGY9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc5a7Q8BGY9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc5a7Q8BGY9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc5a7Q8BGY9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc5a7Q8BGY9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc5a7Q8BGY9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc5a7Q8BGY9 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.19■□□□□ 0.66
Slc5a7Q8BGY9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc5a7Q8BGY9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc5a7Q8BGY9 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.18■□□□□ 0.66
Slc5a7Q8BGY9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc5a7Q8BGY9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.18■□□□□ 0.66
Slc5a7Q8BGY9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Slc5a7Q8BGY9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.17■□□□□ 0.66
Slc5a7Q8BGY9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc5a7Q8BGY9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Slc5a7Q8BGY9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc5a7Q8BGY9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc5a7Q8BGY9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc5a7Q8BGY9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc5a7Q8BGY9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc5a7Q8BGY9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc5a7Q8BGY9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
Slc5a7Q8BGY9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc5a7Q8BGY9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Slc5a7Q8BGY9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Slc5a7Q8BGY9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc5a7Q8BGY9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Slc5a7Q8BGY9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc5a7Q8BGY9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc5a7Q8BGY9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc5a7Q8BGY9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc5a7Q8BGY9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc5a7Q8BGY9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc5a7Q8BGY9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Slc5a7Q8BGY9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc5a7Q8BGY9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.13■□□□□ 0.65
Slc5a7Q8BGY9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc5a7Q8BGY9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc5a7Q8BGY9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Slc5a7Q8BGY9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc5a7Q8BGY9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc5a7Q8BGY9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc5a7Q8BGY9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Slc5a7Q8BGY9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Slc5a7Q8BGY9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Slc5a7Q8BGY9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc5a7Q8BGY9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.11■□□□□ 0.65
Slc5a7Q8BGY9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.11■□□□□ 0.65
Slc5a7Q8BGY9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.11■□□□□ 0.65
Slc5a7Q8BGY9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc5a7Q8BGY9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc5a7Q8BGY9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc5a7Q8BGY9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc5a7Q8BGY9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.11■□□□□ 0.65
Slc5a7Q8BGY9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc5a7Q8BGY9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc5a7Q8BGY9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc5a7Q8BGY9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc5a7Q8BGY9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Slc5a7Q8BGY9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc5a7Q8BGY9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Slc5a7Q8BGY9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc5a7Q8BGY9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc5a7Q8BGY9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc5a7Q8BGY9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc5a7Q8BGY9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.08■□□□□ 0.65
Slc5a7Q8BGY9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc5a7Q8BGY9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc5a7Q8BGY9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc5a7Q8BGY9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc5a7Q8BGY9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.07■□□□□ 0.64
Slc5a7Q8BGY9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Slc5a7Q8BGY9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc5a7Q8BGY9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc5a7Q8BGY9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc5a7Q8BGY9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc5a7Q8BGY9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms