Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim36Q80WG7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim36Q80WG7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim36Q80WG7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim36Q80WG7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim36Q80WG7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim36Q80WG7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Trim36Q80WG7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim36Q80WG7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim36Q80WG7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim36Q80WG7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim36Q80WG7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21■□□□□ 0.95
Trim36Q80WG7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim36Q80WG7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim36Q80WG7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21■□□□□ 0.95
Trim36Q80WG7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim36Q80WG7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim36Q80WG7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim36Q80WG7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim36Q80WG7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim36Q80WG7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim36Q80WG7 Gm9806-201ENSMUST00000051080 552 ntBASIC20.99■□□□□ 0.95
Trim36Q80WG7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim36Q80WG7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim36Q80WG7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim36Q80WG7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim36Q80WG7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim36Q80WG7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim36Q80WG7 Gm16437-201ENSMUST00000025669 507 ntBASIC20.98■□□□□ 0.95
Trim36Q80WG7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim36Q80WG7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim36Q80WG7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim36Q80WG7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim36Q80WG7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim36Q80WG7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.97■□□□□ 0.95
Trim36Q80WG7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim36Q80WG7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim36Q80WG7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim36Q80WG7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim36Q80WG7 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.96■□□□□ 0.95
Trim36Q80WG7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim36Q80WG7 Gm11687-201ENSMUST00000118911 886 ntBASIC20.96■□□□□ 0.95
Trim36Q80WG7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim36Q80WG7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim36Q80WG7 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.96■□□□□ 0.95
Trim36Q80WG7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim36Q80WG7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim36Q80WG7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim36Q80WG7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim36Q80WG7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.95■□□□□ 0.94
Trim36Q80WG7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim36Q80WG7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim36Q80WG7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim36Q80WG7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim36Q80WG7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim36Q80WG7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim36Q80WG7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim36Q80WG7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim36Q80WG7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim36Q80WG7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim36Q80WG7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim36Q80WG7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim36Q80WG7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim36Q80WG7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim36Q80WG7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim36Q80WG7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim36Q80WG7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim36Q80WG7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim36Q80WG7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim36Q80WG7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trim36Q80WG7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim36Q80WG7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim36Q80WG7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim36Q80WG7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim36Q80WG7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim36Q80WG7 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.9■□□□□ 0.94
Trim36Q80WG7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim36Q80WG7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim36Q80WG7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim36Q80WG7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim36Q80WG7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim36Q80WG7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim36Q80WG7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.89■□□□□ 0.93
Trim36Q80WG7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Trim36Q80WG7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim36Q80WG7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim36Q80WG7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim36Q80WG7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim36Q80WG7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim36Q80WG7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.87■□□□□ 0.93
Trim36Q80WG7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trim36Q80WG7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim36Q80WG7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim36Q80WG7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim36Q80WG7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim36Q80WG7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim36Q80WG7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim36Q80WG7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim36Q80WG7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.85■□□□□ 0.93
Trim36Q80WG7 Gm12366-201ENSMUST00000121722 873 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms