Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.82■□□□□ 0.44
Vma21Q78T54 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vma21Q78T54 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vma21Q78T54 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vma21Q78T54 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vma21Q78T54 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.81■□□□□ 0.44
Vma21Q78T54 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.81■□□□□ 0.44
Vma21Q78T54 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vma21Q78T54 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vma21Q78T54 Mir3960-201ENSMUST00000198213 73 ntBASIC17.8■□□□□ 0.44
Vma21Q78T54 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.8■□□□□ 0.44
Vma21Q78T54 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vma21Q78T54 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vma21Q78T54 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.8■□□□□ 0.44
Vma21Q78T54 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vma21Q78T54 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vma21Q78T54 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vma21Q78T54 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.79■□□□□ 0.44
Vma21Q78T54 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vma21Q78T54 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vma21Q78T54 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vma21Q78T54 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vma21Q78T54 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vma21Q78T54 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Vma21Q78T54 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Vma21Q78T54 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.78■□□□□ 0.44
Vma21Q78T54 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vma21Q78T54 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Vma21Q78T54 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vma21Q78T54 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vma21Q78T54 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Vma21Q78T54 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.77■□□□□ 0.44
Vma21Q78T54 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vma21Q78T54 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vma21Q78T54 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vma21Q78T54 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.76■□□□□ 0.43
Vma21Q78T54 Gm7432-201ENSMUST00000210343 879 ntBASIC17.76■□□□□ 0.43
Vma21Q78T54 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vma21Q78T54 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vma21Q78T54 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vma21Q78T54 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vma21Q78T54 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.75■□□□□ 0.43
Vma21Q78T54 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.75■□□□□ 0.43
Vma21Q78T54 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vma21Q78T54 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vma21Q78T54 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.75■□□□□ 0.43
Vma21Q78T54 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vma21Q78T54 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vma21Q78T54 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vma21Q78T54 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vma21Q78T54 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vma21Q78T54 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vma21Q78T54 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.74■□□□□ 0.43
Vma21Q78T54 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vma21Q78T54 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vma21Q78T54 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vma21Q78T54 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vma21Q78T54 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vma21Q78T54 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.73■□□□□ 0.43
Vma21Q78T54 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vma21Q78T54 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vma21Q78T54 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vma21Q78T54 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vma21Q78T54 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.73■□□□□ 0.43
Vma21Q78T54 Terc-201ENSMUST00000082862 423 ntBASIC17.73■□□□□ 0.43
Vma21Q78T54 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vma21Q78T54 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vma21Q78T54 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vma21Q78T54 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.72■□□□□ 0.43
Vma21Q78T54 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vma21Q78T54 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vma21Q78T54 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vma21Q78T54 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Vma21Q78T54 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vma21Q78T54 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vma21Q78T54 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.71■□□□□ 0.43
Vma21Q78T54 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Vma21Q78T54 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Gm11599-201ENSMUST00000118720 878 ntBASIC17.71■□□□□ 0.43
Vma21Q78T54 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vma21Q78T54 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vma21Q78T54 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Vma21Q78T54 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Vma21Q78T54 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vma21Q78T54 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Vma21Q78T54 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.7■□□□□ 0.42
Vma21Q78T54 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vma21Q78T54 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vma21Q78T54 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vma21Q78T54 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vma21Q78T54 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms