Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Cachd1Q6PDJ1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cachd1Q6PDJ1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Cachd1Q6PDJ1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cachd1Q6PDJ1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Cachd1Q6PDJ1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cachd1Q6PDJ1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cachd1Q6PDJ1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.39■■□□□ 1.17
Cachd1Q6PDJ1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Cachd1Q6PDJ1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cachd1Q6PDJ1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.38■■□□□ 1.17
Cachd1Q6PDJ1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.38■■□□□ 1.17
Cachd1Q6PDJ1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cachd1Q6PDJ1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cachd1Q6PDJ1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.38■■□□□ 1.17
Cachd1Q6PDJ1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cachd1Q6PDJ1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Cachd1Q6PDJ1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cachd1Q6PDJ1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
Cachd1Q6PDJ1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Cachd1Q6PDJ1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.36■■□□□ 1.17
Cachd1Q6PDJ1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cachd1Q6PDJ1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Cachd1Q6PDJ1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cachd1Q6PDJ1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.35■■□□□ 1.17
Cachd1Q6PDJ1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cachd1Q6PDJ1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cachd1Q6PDJ1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.35■■□□□ 1.17
Cachd1Q6PDJ1 Gm5874-201ENSMUST00000096101 508 ntBASIC22.35■■□□□ 1.17
Cachd1Q6PDJ1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Cachd1Q6PDJ1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Cachd1Q6PDJ1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cachd1Q6PDJ1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.34■■□□□ 1.17
Cachd1Q6PDJ1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cachd1Q6PDJ1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cachd1Q6PDJ1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.33■■□□□ 1.17
Cachd1Q6PDJ1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
Cachd1Q6PDJ1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cachd1Q6PDJ1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cachd1Q6PDJ1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Cachd1Q6PDJ1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cachd1Q6PDJ1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.32■■□□□ 1.16
Cachd1Q6PDJ1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cachd1Q6PDJ1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cachd1Q6PDJ1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.31■■□□□ 1.16
Cachd1Q6PDJ1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cachd1Q6PDJ1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.31■■□□□ 1.16
Cachd1Q6PDJ1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cachd1Q6PDJ1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.31■■□□□ 1.16
Cachd1Q6PDJ1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cachd1Q6PDJ1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cachd1Q6PDJ1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.3■■□□□ 1.16
Cachd1Q6PDJ1 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.3■■□□□ 1.16
Cachd1Q6PDJ1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Cachd1Q6PDJ1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.3■■□□□ 1.16
Cachd1Q6PDJ1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cachd1Q6PDJ1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cachd1Q6PDJ1 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.29■■□□□ 1.16
Cachd1Q6PDJ1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cachd1Q6PDJ1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cachd1Q6PDJ1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.29■■□□□ 1.16
Cachd1Q6PDJ1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cachd1Q6PDJ1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Cachd1Q6PDJ1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cachd1Q6PDJ1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.28■■□□□ 1.16
Cachd1Q6PDJ1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cachd1Q6PDJ1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.28■■□□□ 1.16
Cachd1Q6PDJ1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cachd1Q6PDJ1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cachd1Q6PDJ1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cachd1Q6PDJ1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cachd1Q6PDJ1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cachd1Q6PDJ1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.27■■□□□ 1.16
Cachd1Q6PDJ1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cachd1Q6PDJ1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Cachd1Q6PDJ1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.26■■□□□ 1.15
Cachd1Q6PDJ1 Gm26571-201ENSMUST00000181399 666 ntBASIC22.26■■□□□ 1.15
Cachd1Q6PDJ1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cachd1Q6PDJ1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cachd1Q6PDJ1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cachd1Q6PDJ1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cachd1Q6PDJ1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.25■■□□□ 1.15
Cachd1Q6PDJ1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.25■■□□□ 1.15
Cachd1Q6PDJ1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cachd1Q6PDJ1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cachd1Q6PDJ1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cachd1Q6PDJ1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cachd1Q6PDJ1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Cachd1Q6PDJ1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms