Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox19Q62249 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox19Q62249 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sox19Q62249 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox19Q62249 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox19Q62249 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox19Q62249 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sox19Q62249 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox19Q62249 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox19Q62249 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox19Q62249 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox19Q62249 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox19Q62249 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox19Q62249 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.67■□□□□ 0.58
Sox19Q62249 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox19Q62249 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.67■□□□□ 0.58
Sox19Q62249 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox19Q62249 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sox19Q62249 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox19Q62249 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox19Q62249 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox19Q62249 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox19Q62249 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox19Q62249 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox19Q62249 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox19Q62249 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox19Q62249 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.65■□□□□ 0.58
Sox19Q62249 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox19Q62249 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox19Q62249 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Sox19Q62249 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox19Q62249 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox19Q62249 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox19Q62249 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox19Q62249 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox19Q62249 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.64■□□□□ 0.57
Sox19Q62249 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Sox19Q62249 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox19Q62249 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox19Q62249 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox19Q62249 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox19Q62249 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox19Q62249 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Sox19Q62249 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox19Q62249 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox19Q62249 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox19Q62249 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sox19Q62249 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sox19Q62249 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox19Q62249 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox19Q62249 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox19Q62249 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox19Q62249 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox19Q62249 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox19Q62249 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox19Q62249 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.62■□□□□ 0.57
Sox19Q62249 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sox19Q62249 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sox19Q62249 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox19Q62249 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Sox19Q62249 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox19Q62249 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sox19Q62249 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox19Q62249 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Sox19Q62249 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox19Q62249 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sox19Q62249 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox19Q62249 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox19Q62249 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox19Q62249 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox19Q62249 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox19Q62249 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.58■□□□□ 0.57
Sox19Q62249 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sox19Q62249 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Sox19Q62249 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sox19Q62249 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox19Q62249 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.57■□□□□ 0.56
Sox19Q62249 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox19Q62249 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox19Q62249 Gm22567-201ENSMUST00000175542 342 ntBASIC18.57■□□□□ 0.56
Sox19Q62249 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox19Q62249 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox19Q62249 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox19Q62249 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox19Q62249 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox19Q62249 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sox19Q62249 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.56■□□□□ 0.56
Sox19Q62249 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox19Q62249 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox19Q62249 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox19Q62249 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox19Q62249 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox19Q62249 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox19Q62249 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Sox19Q62249 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox19Q62249 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.55■□□□□ 0.56
Sox19Q62249 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox19Q62249 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox19Q62249 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox19Q62249 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms