Protein–RNA interactions for Protein: Q61574

Foxs1, Forkhead box protein S1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxs1Q61574 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxs1Q61574 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Foxs1Q61574 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxs1Q61574 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxs1Q61574 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxs1Q61574 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Foxs1Q61574 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Foxs1Q61574 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Foxs1Q61574 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.21■□□□□ 0.99
Foxs1Q61574 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Foxs1Q61574 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.21■□□□□ 0.99
Foxs1Q61574 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxs1Q61574 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxs1Q61574 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxs1Q61574 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Foxs1Q61574 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Foxs1Q61574 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxs1Q61574 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxs1Q61574 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.2■□□□□ 0.98
Foxs1Q61574 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.2■□□□□ 0.98
Foxs1Q61574 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Foxs1Q61574 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Foxs1Q61574 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Foxs1Q61574 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.19■□□□□ 0.98
Foxs1Q61574 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Foxs1Q61574 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.19■□□□□ 0.98
Foxs1Q61574 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxs1Q61574 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Foxs1Q61574 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxs1Q61574 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.18■□□□□ 0.98
Foxs1Q61574 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.18■□□□□ 0.98
Foxs1Q61574 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxs1Q61574 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Foxs1Q61574 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxs1Q61574 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.17■□□□□ 0.98
Foxs1Q61574 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxs1Q61574 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.17■□□□□ 0.98
Foxs1Q61574 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Foxs1Q61574 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Foxs1Q61574 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Foxs1Q61574 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Foxs1Q61574 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Foxs1Q61574 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxs1Q61574 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Foxs1Q61574 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxs1Q61574 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Foxs1Q61574 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Foxs1Q61574 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Foxs1Q61574 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Foxs1Q61574 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.14■□□□□ 0.97
Foxs1Q61574 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Foxs1Q61574 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.14■□□□□ 0.97
Foxs1Q61574 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Foxs1Q61574 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Foxs1Q61574 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Foxs1Q61574 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Foxs1Q61574 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxs1Q61574 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Foxs1Q61574 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Foxs1Q61574 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Foxs1Q61574 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxs1Q61574 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.12■□□□□ 0.97
Foxs1Q61574 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxs1Q61574 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Foxs1Q61574 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Foxs1Q61574 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Foxs1Q61574 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Foxs1Q61574 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxs1Q61574 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Foxs1Q61574 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxs1Q61574 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Foxs1Q61574 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxs1Q61574 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Foxs1Q61574 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Foxs1Q61574 Gm5921-201ENSMUST00000075898 882 ntBASIC21.1■□□□□ 0.97
Foxs1Q61574 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Foxs1Q61574 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Foxs1Q61574 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Foxs1Q61574 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxs1Q61574 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxs1Q61574 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxs1Q61574 Gm13238-201ENSMUST00000117655 780 ntBASIC21.09■□□□□ 0.97
Foxs1Q61574 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxs1Q61574 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Foxs1Q61574 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.09■□□□□ 0.97
Foxs1Q61574 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Foxs1Q61574 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Foxs1Q61574 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Foxs1Q61574 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Foxs1Q61574 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Foxs1Q61574 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Foxs1Q61574 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Foxs1Q61574 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Foxs1Q61574 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Foxs1Q61574 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Foxs1Q61574 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Foxs1Q61574 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Foxs1Q61574 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Foxs1Q61574 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Foxs1Q61574 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms