Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.2■■□□□ 1.14
Sdf4Q61112 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sdf4Q61112 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sdf4Q61112 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.2■■□□□ 1.14
Sdf4Q61112 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Sdf4Q61112 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Gm7332-201ENSMUST00000118351 454 ntBASIC22.19■■□□□ 1.14
Sdf4Q61112 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.19■■□□□ 1.14
Sdf4Q61112 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sdf4Q61112 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Sdf4Q61112 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sdf4Q61112 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sdf4Q61112 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.18■■□□□ 1.14
Sdf4Q61112 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.17■■□□□ 1.14
Sdf4Q61112 Gm12366-201ENSMUST00000121722 873 ntBASIC22.17■■□□□ 1.14
Sdf4Q61112 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.17■■□□□ 1.14
Sdf4Q61112 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.17■■□□□ 1.14
Sdf4Q61112 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.17■■□□□ 1.14
Sdf4Q61112 Gm5786-201ENSMUST00000085368 882 ntBASIC22.17■■□□□ 1.14
Sdf4Q61112 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sdf4Q61112 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sdf4Q61112 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.16■■□□□ 1.14
Sdf4Q61112 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.16■■□□□ 1.14
Sdf4Q61112 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.16■■□□□ 1.14
Sdf4Q61112 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sdf4Q61112 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sdf4Q61112 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Sdf4Q61112 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sdf4Q61112 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sdf4Q61112 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Sdf4Q61112 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.15■■□□□ 1.14
Sdf4Q61112 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Sdf4Q61112 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.15■■□□□ 1.14
Sdf4Q61112 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sdf4Q61112 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Sdf4Q61112 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sdf4Q61112 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Sdf4Q61112 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Sdf4Q61112 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sdf4Q61112 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.14■■□□□ 1.13
Sdf4Q61112 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Sdf4Q61112 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Sdf4Q61112 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Sdf4Q61112 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sdf4Q61112 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Sdf4Q61112 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sdf4Q61112 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.13■■□□□ 1.13
Sdf4Q61112 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sdf4Q61112 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sdf4Q61112 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sdf4Q61112 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.12■■□□□ 1.13
Sdf4Q61112 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Sdf4Q61112 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sdf4Q61112 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sdf4Q61112 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Gm22567-201ENSMUST00000175542 342 ntBASIC22.11■■□□□ 1.13
Sdf4Q61112 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sdf4Q61112 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sdf4Q61112 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Sdf4Q61112 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.09■■□□□ 1.13
Sdf4Q61112 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.08■■□□□ 1.13
Sdf4Q61112 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Sdf4Q61112 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.08■■□□□ 1.13
Sdf4Q61112 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sdf4Q61112 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sdf4Q61112 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sdf4Q61112 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sdf4Q61112 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sdf4Q61112 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.06■■□□□ 1.12
Sdf4Q61112 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms