Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav2Q5R1I9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav2Q5R1I9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav2Q5R1I9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav2Q5R1I9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav2Q5R1I9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav2Q5R1I9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav2Q5R1I9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav2Q5R1I9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav2Q5R1I9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav2Q5R1I9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav2Q5R1I9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav2Q5R1I9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav2Q5R1I9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav2Q5R1I9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav2Q5R1I9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Gm43566-201ENSMUST00000196851 808 ntBASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav2Q5R1I9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav2Q5R1I9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav2Q5R1I9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Trav2Q5R1I9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav2Q5R1I9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav2Q5R1I9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav2Q5R1I9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav2Q5R1I9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Trav2Q5R1I9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.42■□□□□ 0.38
Trav2Q5R1I9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav2Q5R1I9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav2Q5R1I9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trav2Q5R1I9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav2Q5R1I9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.42■□□□□ 0.38
Trav2Q5R1I9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav2Q5R1I9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav2Q5R1I9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav2Q5R1I9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.41■□□□□ 0.38
Trav2Q5R1I9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav2Q5R1I9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav2Q5R1I9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav2Q5R1I9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.4■□□□□ 0.38
Trav2Q5R1I9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trav2Q5R1I9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav2Q5R1I9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav2Q5R1I9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.4■□□□□ 0.38
Trav2Q5R1I9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav2Q5R1I9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav2Q5R1I9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav2Q5R1I9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav2Q5R1I9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.38
Trav2Q5R1I9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav2Q5R1I9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav2Q5R1I9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav2Q5R1I9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav2Q5R1I9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav2Q5R1I9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav2Q5R1I9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav2Q5R1I9 Gm15546-201ENSMUST00000122095 826 ntBASIC17.38■□□□□ 0.37
Trav2Q5R1I9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav2Q5R1I9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav2Q5R1I9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav2Q5R1I9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav2Q5R1I9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav2Q5R1I9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav2Q5R1I9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav2Q5R1I9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trav2Q5R1I9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav2Q5R1I9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav2Q5R1I9 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.36■□□□□ 0.37
Trav2Q5R1I9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.36■□□□□ 0.37
Trav2Q5R1I9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Trav2Q5R1I9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav2Q5R1I9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav2Q5R1I9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.35■□□□□ 0.37
Trav2Q5R1I9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav2Q5R1I9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav2Q5R1I9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav2Q5R1I9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav2Q5R1I9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav2Q5R1I9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav2Q5R1I9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav2Q5R1I9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav2Q5R1I9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav2Q5R1I9 Gm13238-201ENSMUST00000117655 780 ntBASIC17.34■□□□□ 0.37
Trav2Q5R1I9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav2Q5R1I9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trav2Q5R1I9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trav2Q5R1I9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav2Q5R1I9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav2Q5R1I9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav2Q5R1I9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav2Q5R1I9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms