Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6-2Q5R1I4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6-2Q5R1I4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trav6-2Q5R1I4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav6-2Q5R1I4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6-2Q5R1I4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6-2Q5R1I4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trav6-2Q5R1I4 Etf1-202ENSMUST00000180351 108 ntBASIC19.39■□□□□ 0.69
Trav6-2Q5R1I4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6-2Q5R1I4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6-2Q5R1I4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav6-2Q5R1I4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6-2Q5R1I4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6-2Q5R1I4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6-2Q5R1I4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trav6-2Q5R1I4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-2Q5R1I4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trav6-2Q5R1I4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-2Q5R1I4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-2Q5R1I4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.37■□□□□ 0.69
Trav6-2Q5R1I4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.37■□□□□ 0.69
Trav6-2Q5R1I4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-2Q5R1I4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.37■□□□□ 0.69
Trav6-2Q5R1I4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-2Q5R1I4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trav6-2Q5R1I4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-2Q5R1I4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trav6-2Q5R1I4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-2Q5R1I4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6-2Q5R1I4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav6-2Q5R1I4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6-2Q5R1I4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.35■□□□□ 0.69
Trav6-2Q5R1I4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6-2Q5R1I4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav6-2Q5R1I4 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6-2Q5R1I4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6-2Q5R1I4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Trav6-2Q5R1I4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav6-2Q5R1I4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-2Q5R1I4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-2Q5R1I4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trav6-2Q5R1I4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.34■□□□□ 0.69
Trav6-2Q5R1I4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trav6-2Q5R1I4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-2Q5R1I4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-2Q5R1I4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-2Q5R1I4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav6-2Q5R1I4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Trav6-2Q5R1I4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav6-2Q5R1I4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.33■□□□□ 0.69
Trav6-2Q5R1I4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav6-2Q5R1I4 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.33■□□□□ 0.68
Trav6-2Q5R1I4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.33■□□□□ 0.68
Trav6-2Q5R1I4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav6-2Q5R1I4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav6-2Q5R1I4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.33■□□□□ 0.68
Trav6-2Q5R1I4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Trav6-2Q5R1I4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6-2Q5R1I4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav6-2Q5R1I4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6-2Q5R1I4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trav6-2Q5R1I4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav6-2Q5R1I4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6-2Q5R1I4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.31■□□□□ 0.68
Trav6-2Q5R1I4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6-2Q5R1I4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.31■□□□□ 0.68
Trav6-2Q5R1I4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6-2Q5R1I4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trav6-2Q5R1I4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6-2Q5R1I4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-2Q5R1I4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav6-2Q5R1I4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-2Q5R1I4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-2Q5R1I4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trav6-2Q5R1I4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-2Q5R1I4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-2Q5R1I4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-2Q5R1I4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6-2Q5R1I4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6-2Q5R1I4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6-2Q5R1I4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.29■□□□□ 0.68
Trav6-2Q5R1I4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6-2Q5R1I4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trav6-2Q5R1I4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav6-2Q5R1I4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trav6-2Q5R1I4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-2Q5R1I4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-2Q5R1I4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-2Q5R1I4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-2Q5R1I4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.28■□□□□ 0.68
Trav6-2Q5R1I4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.28■□□□□ 0.68
Trav6-2Q5R1I4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Trav6-2Q5R1I4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-2Q5R1I4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-2Q5R1I4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-2Q5R1I4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6-2Q5R1I4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trav6-2Q5R1I4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6-2Q5R1I4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trav6-2Q5R1I4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms