Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.07■□□□□ 0.96
Spg11Q3UHA3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.07■□□□□ 0.96
Spg11Q3UHA3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.07■□□□□ 0.96
Spg11Q3UHA3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Spg11Q3UHA3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Spg11Q3UHA3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Spg11Q3UHA3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Spg11Q3UHA3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Spg11Q3UHA3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Spg11Q3UHA3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.05■□□□□ 0.96
Spg11Q3UHA3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Spg11Q3UHA3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Spg11Q3UHA3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Spg11Q3UHA3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Spg11Q3UHA3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Spg11Q3UHA3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Spg11Q3UHA3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Spg11Q3UHA3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Spg11Q3UHA3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.04■□□□□ 0.96
Spg11Q3UHA3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Spg11Q3UHA3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Spg11Q3UHA3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Spg11Q3UHA3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Spg11Q3UHA3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Spg11Q3UHA3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Spg11Q3UHA3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Spg11Q3UHA3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.03■□□□□ 0.96
Spg11Q3UHA3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Spg11Q3UHA3 Gm5874-201ENSMUST00000096101 508 ntBASIC21.03■□□□□ 0.96
Spg11Q3UHA3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Spg11Q3UHA3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Spg11Q3UHA3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Spg11Q3UHA3 Gm40881-201ENSMUST00000223397 166 ntBASIC21.03■□□□□ 0.96
Spg11Q3UHA3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Spg11Q3UHA3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Spg11Q3UHA3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Spg11Q3UHA3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Spg11Q3UHA3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Spg11Q3UHA3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.02■□□□□ 0.95
Spg11Q3UHA3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Spg11Q3UHA3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.02■□□□□ 0.95
Spg11Q3UHA3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Spg11Q3UHA3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Spg11Q3UHA3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Spg11Q3UHA3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Spg11Q3UHA3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Spg11Q3UHA3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.01■□□□□ 0.95
Spg11Q3UHA3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21■□□□□ 0.95
Spg11Q3UHA3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21■□□□□ 0.95
Spg11Q3UHA3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Spg11Q3UHA3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Spg11Q3UHA3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Spg11Q3UHA3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Spg11Q3UHA3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Spg11Q3UHA3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Spg11Q3UHA3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.99■□□□□ 0.95
Spg11Q3UHA3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Spg11Q3UHA3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Spg11Q3UHA3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Spg11Q3UHA3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.98■□□□□ 0.95
Spg11Q3UHA3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.97■□□□□ 0.95
Spg11Q3UHA3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Spg11Q3UHA3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Spg11Q3UHA3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Spg11Q3UHA3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.97■□□□□ 0.95
Spg11Q3UHA3 Gm6139-201ENSMUST00000079261 882 ntBASIC20.97■□□□□ 0.95
Spg11Q3UHA3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Spg11Q3UHA3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Spg11Q3UHA3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.96■□□□□ 0.95
Spg11Q3UHA3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.96■□□□□ 0.95
Spg11Q3UHA3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Spg11Q3UHA3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Spg11Q3UHA3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Spg11Q3UHA3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Spg11Q3UHA3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Spg11Q3UHA3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Spg11Q3UHA3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Spg11Q3UHA3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Spg11Q3UHA3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Spg11Q3UHA3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
Spg11Q3UHA3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg11Q3UHA3 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.93■□□□□ 0.94
Spg11Q3UHA3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.93■□□□□ 0.94
Spg11Q3UHA3 Gm7291-201ENSMUST00000199147 382 ntBASIC20.93■□□□□ 0.94
Spg11Q3UHA3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Spg11Q3UHA3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Spg11Q3UHA3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.92■□□□□ 0.94
Spg11Q3UHA3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.92■□□□□ 0.94
Spg11Q3UHA3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Spg11Q3UHA3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Spg11Q3UHA3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.91■□□□□ 0.94
Spg11Q3UHA3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Spg11Q3UHA3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Spg11Q3UHA3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Spg11Q3UHA3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Spg11Q3UHA3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Spg11Q3UHA3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Spg11Q3UHA3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Spg11Q3UHA3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.89■□□□□ 0.94
Spg11Q3UHA3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms