Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim6Q3U0I6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim6Q3U0I6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim6Q3U0I6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smim6Q3U0I6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim6Q3U0I6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smim6Q3U0I6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smim6Q3U0I6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Smim6Q3U0I6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim6Q3U0I6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim6Q3U0I6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim6Q3U0I6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smim6Q3U0I6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim6Q3U0I6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim6Q3U0I6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smim6Q3U0I6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim6Q3U0I6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Smim6Q3U0I6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim6Q3U0I6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Smim6Q3U0I6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smim6Q3U0I6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smim6Q3U0I6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.08■□□□□ 0.32
Smim6Q3U0I6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smim6Q3U0I6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smim6Q3U0I6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smim6Q3U0I6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smim6Q3U0I6 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.08■□□□□ 0.32
Smim6Q3U0I6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.07■□□□□ 0.32
Smim6Q3U0I6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim6Q3U0I6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.07■□□□□ 0.32
Smim6Q3U0I6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smim6Q3U0I6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim6Q3U0I6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.07■□□□□ 0.32
Smim6Q3U0I6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smim6Q3U0I6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim6Q3U0I6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smim6Q3U0I6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smim6Q3U0I6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.07■□□□□ 0.32
Smim6Q3U0I6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.06■□□□□ 0.32
Smim6Q3U0I6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smim6Q3U0I6 Gm24804-201ENSMUST00000174982 85 ntBASIC17.06■□□□□ 0.32
Smim6Q3U0I6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim6Q3U0I6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smim6Q3U0I6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim6Q3U0I6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim6Q3U0I6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Smim6Q3U0I6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smim6Q3U0I6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Smim6Q3U0I6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim6Q3U0I6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smim6Q3U0I6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim6Q3U0I6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim6Q3U0I6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Smim6Q3U0I6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smim6Q3U0I6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim6Q3U0I6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim6Q3U0I6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim6Q3U0I6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smim6Q3U0I6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smim6Q3U0I6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smim6Q3U0I6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Smim6Q3U0I6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smim6Q3U0I6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smim6Q3U0I6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smim6Q3U0I6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smim6Q3U0I6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Smim6Q3U0I6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smim6Q3U0I6 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smim6Q3U0I6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.02■□□□□ 0.32
Smim6Q3U0I6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Smim6Q3U0I6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Smim6Q3U0I6 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smim6Q3U0I6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smim6Q3U0I6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim6Q3U0I6 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.01■□□□□ 0.31
Smim6Q3U0I6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim6Q3U0I6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim6Q3U0I6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim6Q3U0I6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smim6Q3U0I6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Smim6Q3U0I6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smim6Q3U0I6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smim6Q3U0I6 Gm8109-201ENSMUST00000194076 746 ntBASIC17■□□□□ 0.31
Smim6Q3U0I6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smim6Q3U0I6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smim6Q3U0I6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smim6Q3U0I6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smim6Q3U0I6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smim6Q3U0I6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smim6Q3U0I6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smim6Q3U0I6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smim6Q3U0I6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smim6Q3U0I6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.99■□□□□ 0.31
Smim6Q3U0I6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smim6Q3U0I6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim6Q3U0I6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smim6Q3U0I6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim6Q3U0I6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim6Q3U0I6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim6Q3U0I6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms