Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cxcr4P70658 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcr4P70658 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcr4P70658 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.49■□□□□ 0.87
Cxcr4P70658 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcr4P70658 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.49■□□□□ 0.87
Cxcr4P70658 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cxcr4P70658 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.48■□□□□ 0.87
Cxcr4P70658 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cxcr4P70658 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.48■□□□□ 0.87
Cxcr4P70658 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cxcr4P70658 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cxcr4P70658 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cxcr4P70658 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cxcr4P70658 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.47■□□□□ 0.87
Cxcr4P70658 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcr4P70658 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcr4P70658 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcr4P70658 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cxcr4P70658 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcr4P70658 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcr4P70658 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcr4P70658 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcr4P70658 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcr4P70658 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cxcr4P70658 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cxcr4P70658 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cxcr4P70658 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.45■□□□□ 0.86
Cxcr4P70658 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.45■□□□□ 0.86
Cxcr4P70658 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.45■□□□□ 0.86
Cxcr4P70658 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cxcr4P70658 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cxcr4P70658 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cxcr4P70658 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cxcr4P70658 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cxcr4P70658 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cxcr4P70658 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cxcr4P70658 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.44■□□□□ 0.86
Cxcr4P70658 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.44■□□□□ 0.86
Cxcr4P70658 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcr4P70658 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.44■□□□□ 0.86
Cxcr4P70658 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcr4P70658 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcr4P70658 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Cxcr4P70658 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.44■□□□□ 0.86
Cxcr4P70658 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcr4P70658 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Cxcr4P70658 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcr4P70658 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcr4P70658 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.43■□□□□ 0.86
Cxcr4P70658 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcr4P70658 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcr4P70658 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcr4P70658 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cxcr4P70658 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.42■□□□□ 0.86
Cxcr4P70658 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcr4P70658 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.42■□□□□ 0.86
Cxcr4P70658 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.42■□□□□ 0.86
Cxcr4P70658 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcr4P70658 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cxcr4P70658 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cxcr4P70658 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cxcr4P70658 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cxcr4P70658 Terc-201ENSMUST00000082862 423 ntBASIC20.41■□□□□ 0.86
Cxcr4P70658 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cxcr4P70658 Cap2-205ENSMUST00000225824 1634 ntBASIC20.41■□□□□ 0.86
Cxcr4P70658 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cxcr4P70658 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.4■□□□□ 0.86
Cxcr4P70658 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cxcr4P70658 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cxcr4P70658 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cxcr4P70658 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cxcr4P70658 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcr4P70658 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcr4P70658 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Cxcr4P70658 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Cxcr4P70658 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcr4P70658 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcr4P70658 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcr4P70658 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcr4P70658 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcr4P70658 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.39■□□□□ 0.85
Cxcr4P70658 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcr4P70658 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcr4P70658 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcr4P70658 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.38■□□□□ 0.85
Cxcr4P70658 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcr4P70658 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcr4P70658 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcr4P70658 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcr4P70658 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcr4P70658 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cxcr4P70658 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcr4P70658 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cxcr4P70658 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cxcr4P70658 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.36■□□□□ 0.85
Cxcr4P70658 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Cxcr4P70658 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cxcr4P70658 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cxcr4P70658 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms