Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ufd1P70362 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ufd1P70362 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ufd1P70362 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ufd1P70362 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ufd1P70362 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ufd1P70362 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ufd1P70362 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ufd1P70362 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ufd1P70362 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ufd1P70362 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.78■□□□□ 0.6
Ufd1P70362 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ufd1P70362 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ufd1P70362 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ufd1P70362 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ufd1P70362 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ufd1P70362 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ufd1P70362 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ufd1P70362 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ufd1P70362 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ufd1P70362 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ufd1P70362 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ufd1P70362 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ufd1P70362 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ufd1P70362 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ufd1P70362 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ufd1P70362 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ufd1P70362 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ufd1P70362 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ufd1P70362 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ufd1P70362 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ufd1P70362 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ufd1P70362 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ufd1P70362 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ufd1P70362 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ufd1P70362 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ufd1P70362 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.73■□□□□ 0.59
Ufd1P70362 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ufd1P70362 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ufd1P70362 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ufd1P70362 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.72■□□□□ 0.59
Ufd1P70362 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ufd1P70362 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Ufd1P70362 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ufd1P70362 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ufd1P70362 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ufd1P70362 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ufd1P70362 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Ufd1P70362 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.71■□□□□ 0.59
Ufd1P70362 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ufd1P70362 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.7■□□□□ 0.58
Ufd1P70362 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ufd1P70362 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Ufd1P70362 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ufd1P70362 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.7■□□□□ 0.58
Ufd1P70362 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ufd1P70362 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ufd1P70362 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.69■□□□□ 0.58
Ufd1P70362 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ufd1P70362 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ufd1P70362 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ufd1P70362 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ufd1P70362 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ufd1P70362 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ufd1P70362 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ufd1P70362 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ufd1P70362 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ufd1P70362 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ufd1P70362 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.68■□□□□ 0.58
Ufd1P70362 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ufd1P70362 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ufd1P70362 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.68■□□□□ 0.58
Ufd1P70362 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ufd1P70362 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ufd1P70362 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ufd1P70362 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ufd1P70362 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.67■□□□□ 0.58
Ufd1P70362 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ufd1P70362 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.67■□□□□ 0.58
Ufd1P70362 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ufd1P70362 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ufd1P70362 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ufd1P70362 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.66■□□□□ 0.58
Ufd1P70362 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ufd1P70362 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
Ufd1P70362 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ufd1P70362 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.65■□□□□ 0.58
Ufd1P70362 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ufd1P70362 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.65■□□□□ 0.58
Ufd1P70362 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ufd1P70362 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ufd1P70362 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ufd1P70362 Gm24970-201ENSMUST00000175582 82 ntBASIC18.64■□□□□ 0.57
Ufd1P70362 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ufd1P70362 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.64■□□□□ 0.57
Ufd1P70362 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ufd1P70362 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ufd1P70362 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ufd1P70362 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ufd1P70362 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms