Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.28■□□□□ 0.52
Gcm1P70348 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gcm1P70348 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gcm1P70348 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gcm1P70348 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Gcm1P70348 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Gcm1P70348 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gcm1P70348 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.27■□□□□ 0.52
Gcm1P70348 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gcm1P70348 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Gcm1P70348 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.26■□□□□ 0.51
Gcm1P70348 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gcm1P70348 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gcm1P70348 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Gcm1P70348 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gcm1P70348 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gcm1P70348 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gcm1P70348 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.25■□□□□ 0.51
Gcm1P70348 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gcm1P70348 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gcm1P70348 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gcm1P70348 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Gcm1P70348 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gcm1P70348 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gcm1P70348 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Gcm1P70348 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Gcm1P70348 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gcm1P70348 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Gcm1P70348 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gcm1P70348 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Gcm1P70348 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Gcm1P70348 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gcm1P70348 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gcm1P70348 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gcm1P70348 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gcm1P70348 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gcm1P70348 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Gcm1P70348 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gcm1P70348 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gcm1P70348 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gcm1P70348 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gcm1P70348 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gcm1P70348 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gcm1P70348 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gcm1P70348 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.21■□□□□ 0.51
Gcm1P70348 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gcm1P70348 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gcm1P70348 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.21■□□□□ 0.5
Gcm1P70348 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gcm1P70348 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gcm1P70348 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gcm1P70348 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gcm1P70348 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.2■□□□□ 0.5
Gcm1P70348 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.2■□□□□ 0.5
Gcm1P70348 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gcm1P70348 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gcm1P70348 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gcm1P70348 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gcm1P70348 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gcm1P70348 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gcm1P70348 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gcm1P70348 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Gcm1P70348 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Gcm1P70348 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gcm1P70348 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.19■□□□□ 0.5
Gcm1P70348 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.19■□□□□ 0.5
Gcm1P70348 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.19■□□□□ 0.5
Gcm1P70348 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gcm1P70348 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gcm1P70348 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.18■□□□□ 0.5
Gcm1P70348 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gcm1P70348 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Gcm1P70348 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gcm1P70348 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gcm1P70348 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gcm1P70348 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gcm1P70348 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Gcm1P70348 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gcm1P70348 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.16■□□□□ 0.5
Gcm1P70348 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gcm1P70348 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.16■□□□□ 0.5
Gcm1P70348 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gcm1P70348 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gcm1P70348 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Gcm1P70348 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gcm1P70348 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gcm1P70348 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.15■□□□□ 0.5
Gcm1P70348 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gcm1P70348 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.15■□□□□ 0.5
Gcm1P70348 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.15■□□□□ 0.5
Gcm1P70348 Gm5812-201ENSMUST00000061073 957 ntBASIC18.15■□□□□ 0.5
Gcm1P70348 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.15■□□□□ 0.5
Gcm1P70348 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Gcm1P70348 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gcm1P70348 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gcm1P70348 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.14■□□□□ 0.49
Gcm1P70348 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gcm1P70348 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gcm1P70348 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gcm1P70348 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 127.3 ms