Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.48■□□□□ 0.87
Six5P70178 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six5P70178 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.48■□□□□ 0.87
Six5P70178 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.47■□□□□ 0.87
Six5P70178 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six5P70178 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Six5P70178 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six5P70178 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six5P70178 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six5P70178 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six5P70178 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Six5P70178 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six5P70178 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six5P70178 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six5P70178 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Six5P70178 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Six5P70178 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six5P70178 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Six5P70178 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six5P70178 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six5P70178 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.45■□□□□ 0.86
Six5P70178 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.45■□□□□ 0.86
Six5P70178 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.45■□□□□ 0.86
Six5P70178 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.45■□□□□ 0.86
Six5P70178 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Six5P70178 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six5P70178 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six5P70178 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Six5P70178 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Six5P70178 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Six5P70178 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six5P70178 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six5P70178 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Six5P70178 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Six5P70178 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Six5P70178 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Six5P70178 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six5P70178 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.43■□□□□ 0.86
Six5P70178 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Six5P70178 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six5P70178 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Six5P70178 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Six5P70178 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Six5P70178 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Six5P70178 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Six5P70178 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Six5P70178 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six5P70178 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Six5P70178 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six5P70178 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six5P70178 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six5P70178 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Six5P70178 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Six5P70178 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.4■□□□□ 0.86
Six5P70178 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Six5P70178 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six5P70178 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.4■□□□□ 0.86
Six5P70178 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.4■□□□□ 0.86
Six5P70178 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six5P70178 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six5P70178 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six5P70178 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Six5P70178 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Six5P70178 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.39■□□□□ 0.86
Six5P70178 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Six5P70178 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Six5P70178 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Six5P70178 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Six5P70178 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Six5P70178 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Six5P70178 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Six5P70178 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Six5P70178 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Six5P70178 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.38■□□□□ 0.85
Six5P70178 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Six5P70178 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Six5P70178 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six5P70178 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Six5P70178 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six5P70178 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six5P70178 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Six5P70178 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Six5P70178 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Six5P70178 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Six5P70178 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Six5P70178 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Six5P70178 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six5P70178 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Six5P70178 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.36■□□□□ 0.85
Six5P70178 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Six5P70178 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six5P70178 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six5P70178 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six5P70178 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Six5P70178 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.34■□□□□ 0.85
Six5P70178 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Six5P70178 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six5P70178 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six5P70178 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six5P70178 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms