Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ythdf1P59326 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdf1P59326 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdf1P59326 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdf1P59326 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdf1P59326 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdf1P59326 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.2■□□□□ 0.98
Ythdf1P59326 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Ythdf1P59326 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdf1P59326 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ythdf1P59326 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ythdf1P59326 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ythdf1P59326 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ythdf1P59326 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ythdf1P59326 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ythdf1P59326 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ythdf1P59326 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ythdf1P59326 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ythdf1P59326 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Ythdf1P59326 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.18■□□□□ 0.98
Ythdf1P59326 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ythdf1P59326 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ythdf1P59326 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ythdf1P59326 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.18■□□□□ 0.98
Ythdf1P59326 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ythdf1P59326 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.18■□□□□ 0.98
Ythdf1P59326 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ythdf1P59326 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ythdf1P59326 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ythdf1P59326 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ythdf1P59326 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ythdf1P59326 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ythdf1P59326 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ythdf1P59326 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ythdf1P59326 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ythdf1P59326 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ythdf1P59326 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ythdf1P59326 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ythdf1P59326 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ythdf1P59326 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ythdf1P59326 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ythdf1P59326 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Ythdf1P59326 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ythdf1P59326 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.15■□□□□ 0.98
Ythdf1P59326 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.15■□□□□ 0.98
Ythdf1P59326 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ythdf1P59326 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ythdf1P59326 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ythdf1P59326 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ythdf1P59326 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ythdf1P59326 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ythdf1P59326 Gm22567-201ENSMUST00000175542 342 ntBASIC21.14■□□□□ 0.97
Ythdf1P59326 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.14■□□□□ 0.97
Ythdf1P59326 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ythdf1P59326 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ythdf1P59326 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ythdf1P59326 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.13■□□□□ 0.97
Ythdf1P59326 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ythdf1P59326 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ythdf1P59326 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ythdf1P59326 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ythdf1P59326 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ythdf1P59326 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ythdf1P59326 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ythdf1P59326 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.12■□□□□ 0.97
Ythdf1P59326 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ythdf1P59326 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Ythdf1P59326 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ythdf1P59326 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ythdf1P59326 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.11■□□□□ 0.97
Ythdf1P59326 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.11■□□□□ 0.97
Ythdf1P59326 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ythdf1P59326 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ythdf1P59326 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ythdf1P59326 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ythdf1P59326 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ythdf1P59326 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Ythdf1P59326 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ythdf1P59326 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ythdf1P59326 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ythdf1P59326 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ythdf1P59326 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ythdf1P59326 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ythdf1P59326 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ythdf1P59326 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ythdf1P59326 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ythdf1P59326 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ythdf1P59326 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ythdf1P59326 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ythdf1P59326 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ythdf1P59326 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ythdf1P59326 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.05■□□□□ 0.96
Ythdf1P59326 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ythdf1P59326 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Ythdf1P59326 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ythdf1P59326 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ythdf1P59326 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ythdf1P59326 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ythdf1P59326 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ythdf1P59326 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms