Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdx1P52946 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pdx1P52946 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdx1P52946 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdx1P52946 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pdx1P52946 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.72■■□□□ 1.07
Pdx1P52946 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdx1P52946 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pdx1P52946 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pdx1P52946 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdx1P52946 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pdx1P52946 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdx1P52946 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdx1P52946 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pdx1P52946 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.7■■□□□ 1.06
Pdx1P52946 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pdx1P52946 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdx1P52946 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdx1P52946 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdx1P52946 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pdx1P52946 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pdx1P52946 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pdx1P52946 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdx1P52946 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Pdx1P52946 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pdx1P52946 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.68■■□□□ 1.06
Pdx1P52946 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pdx1P52946 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pdx1P52946 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.67■■□□□ 1.06
Pdx1P52946 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Pdx1P52946 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pdx1P52946 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pdx1P52946 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.66■■□□□ 1.06
Pdx1P52946 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdx1P52946 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.66■■□□□ 1.06
Pdx1P52946 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdx1P52946 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdx1P52946 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdx1P52946 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdx1P52946 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdx1P52946 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pdx1P52946 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.65■■□□□ 1.06
Pdx1P52946 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.65■■□□□ 1.06
Pdx1P52946 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pdx1P52946 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pdx1P52946 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pdx1P52946 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pdx1P52946 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdx1P52946 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.64■■□□□ 1.05
Pdx1P52946 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdx1P52946 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdx1P52946 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdx1P52946 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pdx1P52946 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdx1P52946 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pdx1P52946 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdx1P52946 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pdx1P52946 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdx1P52946 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdx1P52946 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pdx1P52946 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pdx1P52946 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdx1P52946 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pdx1P52946 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.62■■□□□ 1.05
Pdx1P52946 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pdx1P52946 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pdx1P52946 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdx1P52946 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdx1P52946 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pdx1P52946 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdx1P52946 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdx1P52946 Gm10420-201ENSMUST00000121713 882 ntBASIC21.61■■□□□ 1.05
Pdx1P52946 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdx1P52946 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pdx1P52946 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pdx1P52946 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdx1P52946 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pdx1P52946 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdx1P52946 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdx1P52946 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdx1P52946 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pdx1P52946 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pdx1P52946 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Pdx1P52946 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Pdx1P52946 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pdx1P52946 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pdx1P52946 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pdx1P52946 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pdx1P52946 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pdx1P52946 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.59■■□□□ 1.05
Pdx1P52946 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pdx1P52946 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Pdx1P52946 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pdx1P52946 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.58■■□□□ 1.05
Pdx1P52946 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pdx1P52946 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pdx1P52946 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pdx1P52946 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pdx1P52946 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pdx1P52946 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms