Protein–RNA interactions for Protein: P35343

Cxcr2, C-X-C chemokine receptor type 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr2P35343 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
Cxcr2P35343 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Cxcr2P35343 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cxcr2P35343 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cxcr2P35343 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.42■■□□□ 1.18
Cxcr2P35343 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cxcr2P35343 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.42■■□□□ 1.18
Cxcr2P35343 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Cxcr2P35343 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cxcr2P35343 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cxcr2P35343 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcr2P35343 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcr2P35343 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcr2P35343 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcr2P35343 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Cxcr2P35343 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcr2P35343 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcr2P35343 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcr2P35343 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcr2P35343 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cxcr2P35343 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cxcr2P35343 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.4■■□□□ 1.18
Cxcr2P35343 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Cxcr2P35343 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.4■■□□□ 1.18
Cxcr2P35343 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Cxcr2P35343 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Cxcr2P35343 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Cxcr2P35343 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cxcr2P35343 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.39■■□□□ 1.17
Cxcr2P35343 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cxcr2P35343 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.39■■□□□ 1.17
Cxcr2P35343 Gm44428-201ENSMUST00000204474 874 ntBASIC22.39■■□□□ 1.17
Cxcr2P35343 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.39■■□□□ 1.17
Cxcr2P35343 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cxcr2P35343 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cxcr2P35343 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cxcr2P35343 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cxcr2P35343 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cxcr2P35343 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cxcr2P35343 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cxcr2P35343 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cxcr2P35343 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cxcr2P35343 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr2P35343 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr2P35343 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr2P35343 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr2P35343 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Cxcr2P35343 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr2P35343 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cxcr2P35343 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Cxcr2P35343 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.36■■□□□ 1.17
Cxcr2P35343 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cxcr2P35343 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.35■■□□□ 1.17
Cxcr2P35343 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cxcr2P35343 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cxcr2P35343 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cxcr2P35343 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.33■■□□□ 1.17
Cxcr2P35343 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cxcr2P35343 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cxcr2P35343 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.32■■□□□ 1.16
Cxcr2P35343 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.31■■□□□ 1.16
Cxcr2P35343 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cxcr2P35343 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cxcr2P35343 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cxcr2P35343 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.31■■□□□ 1.16
Cxcr2P35343 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cxcr2P35343 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cxcr2P35343 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.3■■□□□ 1.16
Cxcr2P35343 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cxcr2P35343 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cxcr2P35343 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.3■■□□□ 1.16
Cxcr2P35343 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cxcr2P35343 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cxcr2P35343 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cxcr2P35343 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cxcr2P35343 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cxcr2P35343 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cxcr2P35343 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cxcr2P35343 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.29■■□□□ 1.16
Cxcr2P35343 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cxcr2P35343 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.28■■□□□ 1.16
Cxcr2P35343 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cxcr2P35343 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Cxcr2P35343 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.27■■□□□ 1.16
Cxcr2P35343 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cxcr2P35343 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cxcr2P35343 Gm10420-201ENSMUST00000121713 882 ntBASIC22.26■■□□□ 1.15
Cxcr2P35343 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cxcr2P35343 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cxcr2P35343 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cxcr2P35343 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.26■■□□□ 1.15
Cxcr2P35343 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cxcr2P35343 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cxcr2P35343 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.25■■□□□ 1.15
Cxcr2P35343 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Cxcr2P35343 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Cxcr2P35343 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Cxcr2P35343 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cxcr2P35343 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cxcr2P35343 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms