Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cd40P27512 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cd40P27512 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd40P27512 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd40P27512 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd40P27512 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cd40P27512 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd40P27512 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd40P27512 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cd40P27512 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.9■□□□□ 0.78
Cd40P27512 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd40P27512 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd40P27512 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cd40P27512 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd40P27512 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd40P27512 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.89■□□□□ 0.77
Cd40P27512 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd40P27512 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cd40P27512 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cd40P27512 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd40P27512 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cd40P27512 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd40P27512 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd40P27512 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cd40P27512 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd40P27512 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd40P27512 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cd40P27512 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.88■□□□□ 0.77
Cd40P27512 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd40P27512 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd40P27512 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cd40P27512 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cd40P27512 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cd40P27512 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.87■□□□□ 0.77
Cd40P27512 Cap2-205ENSMUST00000225824 1634 ntBASIC19.87■□□□□ 0.77
Cd40P27512 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40P27512 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40P27512 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40P27512 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40P27512 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Cd40P27512 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40P27512 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40P27512 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40P27512 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cd40P27512 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd40P27512 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd40P27512 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd40P27512 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cd40P27512 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd40P27512 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cd40P27512 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cd40P27512 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.85■□□□□ 0.77
Cd40P27512 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Cd40P27512 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cd40P27512 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cd40P27512 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cd40P27512 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cd40P27512 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cd40P27512 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cd40P27512 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cd40P27512 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cd40P27512 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd40P27512 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cd40P27512 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.83■□□□□ 0.77
Cd40P27512 Gm10420-201ENSMUST00000121713 882 ntBASIC19.83■□□□□ 0.77
Cd40P27512 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.83■□□□□ 0.77
Cd40P27512 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd40P27512 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd40P27512 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cd40P27512 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cd40P27512 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cd40P27512 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Cd40P27512 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd40P27512 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.82■□□□□ 0.76
Cd40P27512 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cd40P27512 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cd40P27512 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd40P27512 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd40P27512 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd40P27512 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cd40P27512 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.79■□□□□ 0.76
Cd40P27512 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd40P27512 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cd40P27512 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd40P27512 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd40P27512 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd40P27512 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd40P27512 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd40P27512 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd40P27512 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd40P27512 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cd40P27512 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.77■□□□□ 0.76
Cd40P27512 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd40P27512 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.77■□□□□ 0.76
Cd40P27512 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd40P27512 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.76■□□□□ 0.75
Cd40P27512 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd40P27512 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd40P27512 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cd40P27512 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms