Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.49■□□□□ 0.87
TP20293 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TP20293 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TP20293 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.49■□□□□ 0.87
TP20293 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TP20293 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TP20293 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TP20293 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.48■□□□□ 0.87
TP20293 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TP20293 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TP20293 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TP20293 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TP20293 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TP20293 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.46■□□□□ 0.87
TP20293 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TP20293 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.46■□□□□ 0.87
TP20293 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TP20293 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TP20293 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TP20293 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TP20293 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TP20293 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.45■□□□□ 0.86
TP20293 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TP20293 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TP20293 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TP20293 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TP20293 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TP20293 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TP20293 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TP20293 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.44■□□□□ 0.86
TP20293 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TP20293 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TP20293 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.43■□□□□ 0.86
TP20293 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TP20293 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.43■□□□□ 0.86
TP20293 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TP20293 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TP20293 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TP20293 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TP20293 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TP20293 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TP20293 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TP20293 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TP20293 Gm27502-201ENSMUST00000183495 199 ntBASIC20.41■□□□□ 0.86
TP20293 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TP20293 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TP20293 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TP20293 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TP20293 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TP20293 Gm14523-201ENSMUST00000117260 558 ntBASIC20.4■□□□□ 0.86
TP20293 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.4■□□□□ 0.86
TP20293 Gm12366-201ENSMUST00000121722 873 ntBASIC20.4■□□□□ 0.86
TP20293 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.4■□□□□ 0.86
TP20293 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TP20293 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.4■□□□□ 0.86
TP20293 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TP20293 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.4■□□□□ 0.86
TP20293 Gm5786-201ENSMUST00000085368 882 ntBASIC20.4■□□□□ 0.86
TP20293 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TP20293 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TP20293 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TP20293 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TP20293 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TP20293 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.39■□□□□ 0.85
TP20293 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.39■□□□□ 0.85
TP20293 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.39■□□□□ 0.85
TP20293 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
TP20293 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TP20293 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TP20293 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TP20293 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TP20293 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TP20293 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.38■□□□□ 0.85
TP20293 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TP20293 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TP20293 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
TP20293 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TP20293 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TP20293 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TP20293 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TP20293 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TP20293 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TP20293 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TP20293 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TP20293 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TP20293 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.36■□□□□ 0.85
TP20293 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TP20293 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TP20293 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TP20293 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TP20293 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TP20293 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TP20293 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TP20293 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TP20293 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TP20293 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TP20293 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TP20293 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TP20293 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TP20293 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms