Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Fn1P11276 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Fn1P11276 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Fn1P11276 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fn1P11276 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fn1P11276 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fn1P11276 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fn1P11276 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Fn1P11276 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Fn1P11276 Gm27011-201ENSMUST00000182352 972 ntBASIC17.5■□□□□ 0.39
Fn1P11276 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.5■□□□□ 0.39
Fn1P11276 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Fn1P11276 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fn1P11276 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fn1P11276 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.49■□□□□ 0.39
Fn1P11276 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Fn1P11276 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Fn1P11276 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.49■□□□□ 0.39
Fn1P11276 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fn1P11276 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fn1P11276 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Fn1P11276 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.48■□□□□ 0.39
Fn1P11276 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.48■□□□□ 0.39
Fn1P11276 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fn1P11276 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fn1P11276 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fn1P11276 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.47■□□□□ 0.39
Fn1P11276 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.47■□□□□ 0.39
Fn1P11276 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fn1P11276 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fn1P11276 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Fn1P11276 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.46■□□□□ 0.39
Fn1P11276 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.46■□□□□ 0.39
Fn1P11276 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.46■□□□□ 0.39
Fn1P11276 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Fn1P11276 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Fn1P11276 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Fn1P11276 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.46■□□□□ 0.39
Fn1P11276 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fn1P11276 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.45■□□□□ 0.38
Fn1P11276 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Fn1P11276 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fn1P11276 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Fn1P11276 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Fn1P11276 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Fn1P11276 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fn1P11276 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.44■□□□□ 0.38
Fn1P11276 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.44■□□□□ 0.38
Fn1P11276 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.44■□□□□ 0.38
Fn1P11276 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Fn1P11276 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fn1P11276 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.44■□□□□ 0.38
Fn1P11276 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Fn1P11276 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fn1P11276 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fn1P11276 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fn1P11276 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Fn1P11276 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fn1P11276 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Fn1P11276 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fn1P11276 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fn1P11276 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.42■□□□□ 0.38
Fn1P11276 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Fn1P11276 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.41■□□□□ 0.38
Fn1P11276 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.41■□□□□ 0.38
Fn1P11276 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Fn1P11276 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Fn1P11276 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Fn1P11276 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Fn1P11276 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Fn1P11276 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fn1P11276 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.4■□□□□ 0.38
Fn1P11276 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fn1P11276 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.4■□□□□ 0.38
Fn1P11276 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fn1P11276 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Fn1P11276 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.4■□□□□ 0.38
Fn1P11276 Gm6139-201ENSMUST00000079261 882 ntBASIC17.4■□□□□ 0.38
Fn1P11276 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fn1P11276 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fn1P11276 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Fn1P11276 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.4■□□□□ 0.38
Fn1P11276 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Fn1P11276 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fn1P11276 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.39■□□□□ 0.37
Fn1P11276 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Fn1P11276 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
Fn1P11276 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Fn1P11276 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fn1P11276 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fn1P11276 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Fn1P11276 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Fn1P11276 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Fn1P11276 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Fn1P11276 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.38■□□□□ 0.37
Fn1P11276 Gm5874-201ENSMUST00000096101 508 ntBASIC17.38■□□□□ 0.37
Fn1P11276 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Fn1P11276 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Fn1P11276 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.37■□□□□ 0.37
Fn1P11276 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms