Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nid1P10493 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nid1P10493 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nid1P10493 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nid1P10493 Gm44428-201ENSMUST00000204474 874 ntBASIC20.64■□□□□ 0.89
Nid1P10493 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nid1P10493 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nid1P10493 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nid1P10493 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nid1P10493 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nid1P10493 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid1P10493 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nid1P10493 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nid1P10493 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nid1P10493 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.62■□□□□ 0.89
Nid1P10493 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nid1P10493 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nid1P10493 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nid1P10493 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.61■□□□□ 0.89
Nid1P10493 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nid1P10493 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nid1P10493 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nid1P10493 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nid1P10493 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nid1P10493 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nid1P10493 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nid1P10493 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Nid1P10493 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nid1P10493 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.59■□□□□ 0.89
Nid1P10493 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nid1P10493 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.58■□□□□ 0.89
Nid1P10493 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.58■□□□□ 0.89
Nid1P10493 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nid1P10493 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nid1P10493 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nid1P10493 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid1P10493 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Nid1P10493 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nid1P10493 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid1P10493 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid1P10493 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nid1P10493 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid1P10493 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid1P10493 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nid1P10493 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid1P10493 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid1P10493 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid1P10493 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid1P10493 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nid1P10493 Scarna2-201ENSMUST00000157560 414 ntBASIC20.55■□□□□ 0.88
Nid1P10493 Gm9806-201ENSMUST00000051080 552 ntBASIC20.55■□□□□ 0.88
Nid1P10493 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Nid1P10493 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid1P10493 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nid1P10493 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.54■□□□□ 0.88
Nid1P10493 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nid1P10493 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid1P10493 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.53■□□□□ 0.88
Nid1P10493 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid1P10493 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid1P10493 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Nid1P10493 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nid1P10493 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.52■□□□□ 0.88
Nid1P10493 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.52■□□□□ 0.88
Nid1P10493 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.52■□□□□ 0.88
Nid1P10493 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nid1P10493 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nid1P10493 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nid1P10493 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.52■□□□□ 0.88
Nid1P10493 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Nid1P10493 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Nid1P10493 Gm16437-201ENSMUST00000025669 507 ntBASIC20.51■□□□□ 0.87
Nid1P10493 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nid1P10493 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Nid1P10493 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.51■□□□□ 0.87
Nid1P10493 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.51■□□□□ 0.87
Nid1P10493 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid1P10493 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Nid1P10493 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid1P10493 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid1P10493 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.5■□□□□ 0.87
Nid1P10493 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid1P10493 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nid1P10493 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nid1P10493 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nid1P10493 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nid1P10493 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.49■□□□□ 0.87
Nid1P10493 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nid1P10493 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nid1P10493 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms