Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl1P10146 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl1P10146 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl1P10146 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.02■□□□□ 0.32
Ccl1P10146 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl1P10146 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ccl1P10146 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl1P10146 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ccl1P10146 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccl1P10146 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccl1P10146 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccl1P10146 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.01■□□□□ 0.31
Ccl1P10146 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl1P10146 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl1P10146 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.01■□□□□ 0.31
Ccl1P10146 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccl1P10146 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17■□□□□ 0.31
Ccl1P10146 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl1P10146 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl1P10146 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl1P10146 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.99■□□□□ 0.31
Ccl1P10146 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl1P10146 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccl1P10146 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl1P10146 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccl1P10146 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl1P10146 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl1P10146 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl1P10146 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl1P10146 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.98■□□□□ 0.31
Ccl1P10146 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ccl1P10146 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl1P10146 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Ccl1P10146 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccl1P10146 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccl1P10146 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccl1P10146 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccl1P10146 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccl1P10146 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ccl1P10146 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ccl1P10146 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccl1P10146 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccl1P10146 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccl1P10146 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccl1P10146 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccl1P10146 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ccl1P10146 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.95■□□□□ 0.3
Ccl1P10146 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccl1P10146 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.95■□□□□ 0.3
Ccl1P10146 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.95■□□□□ 0.3
Ccl1P10146 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.95■□□□□ 0.3
Ccl1P10146 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.95■□□□□ 0.3
Ccl1P10146 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Ccl1P10146 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.94■□□□□ 0.3
Ccl1P10146 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccl1P10146 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccl1P10146 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccl1P10146 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.93■□□□□ 0.3
Ccl1P10146 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ccl1P10146 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccl1P10146 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccl1P10146 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl1P10146 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccl1P10146 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl1P10146 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccl1P10146 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl1P10146 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccl1P10146 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ccl1P10146 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl1P10146 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ccl1P10146 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccl1P10146 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Ccl1P10146 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.9■□□□□ 0.3
Ccl1P10146 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Ccl1P10146 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccl1P10146 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
Ccl1P10146 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl1P10146 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl1P10146 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl1P10146 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl1P10146 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl1P10146 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl1P10146 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.89■□□□□ 0.29
Ccl1P10146 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccl1P10146 Gm24970-201ENSMUST00000175582 82 ntBASIC16.88■□□□□ 0.29
Ccl1P10146 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl1P10146 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ccl1P10146 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccl1P10146 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms