Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P06344 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P06344 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
P06344 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
P06344 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
P06344 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P06344 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
P06344 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
P06344 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P06344 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.56■□□□□ 0.72
P06344 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P06344 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
P06344 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
P06344 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.55■□□□□ 0.72
P06344 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
P06344 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P06344 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P06344 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P06344 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.55■□□□□ 0.72
P06344 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
P06344 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P06344 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.54■□□□□ 0.72
P06344 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
P06344 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P06344 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P06344 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
P06344 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P06344 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P06344 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.53■□□□□ 0.72
P06344 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P06344 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
P06344 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
P06344 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P06344 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P06344 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P06344 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
P06344 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
P06344 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
P06344 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
P06344 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P06344 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P06344 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P06344 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P06344 Gm5921-201ENSMUST00000075898 882 ntBASIC19.51■□□□□ 0.71
P06344 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P06344 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
P06344 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P06344 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
P06344 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.51■□□□□ 0.71
P06344 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
P06344 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P06344 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P06344 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P06344 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P06344 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P06344 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P06344 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
P06344 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P06344 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.49■□□□□ 0.71
P06344 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P06344 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P06344 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P06344 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P06344 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
P06344 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P06344 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
P06344 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P06344 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P06344 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
P06344 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.48■□□□□ 0.71
P06344 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P06344 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P06344 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.48■□□□□ 0.71
P06344 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P06344 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P06344 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P06344 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P06344 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
P06344 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
P06344 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
P06344 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.46■□□□□ 0.71
P06344 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
P06344 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P06344 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P06344 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P06344 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
P06344 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
P06344 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P06344 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P06344 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.44■□□□□ 0.7
P06344 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
P06344 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
P06344 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
P06344 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
P06344 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.43■□□□□ 0.7
P06344 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
P06344 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
P06344 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.42■□□□□ 0.7
P06344 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
P06344 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms