Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.07■□□□□ 0.96
Tgfbr3O88393 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfbr3O88393 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfbr3O88393 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfbr3O88393 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.07■□□□□ 0.96
Tgfbr3O88393 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfbr3O88393 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfbr3O88393 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Tgfbr3O88393 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.06■□□□□ 0.96
Tgfbr3O88393 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Tgfbr3O88393 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tgfbr3O88393 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tgfbr3O88393 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.05■□□□□ 0.96
Tgfbr3O88393 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.05■□□□□ 0.96
Tgfbr3O88393 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Tgfbr3O88393 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tgfbr3O88393 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.04■□□□□ 0.96
Tgfbr3O88393 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.04■□□□□ 0.96
Tgfbr3O88393 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.04■□□□□ 0.96
Tgfbr3O88393 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tgfbr3O88393 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tgfbr3O88393 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.03■□□□□ 0.96
Tgfbr3O88393 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tgfbr3O88393 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tgfbr3O88393 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tgfbr3O88393 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tgfbr3O88393 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tgfbr3O88393 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.02■□□□□ 0.96
Tgfbr3O88393 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tgfbr3O88393 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tgfbr3O88393 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tgfbr3O88393 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tgfbr3O88393 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tgfbr3O88393 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tgfbr3O88393 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Tgfbr3O88393 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tgfbr3O88393 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tgfbr3O88393 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Tgfbr3O88393 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tgfbr3O88393 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.01■□□□□ 0.95
Tgfbr3O88393 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tgfbr3O88393 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tgfbr3O88393 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tgfbr3O88393 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tgfbr3O88393 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21■□□□□ 0.95
Tgfbr3O88393 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21■□□□□ 0.95
Tgfbr3O88393 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21■□□□□ 0.95
Tgfbr3O88393 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Tgfbr3O88393 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tgfbr3O88393 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Tgfbr3O88393 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.99■□□□□ 0.95
Tgfbr3O88393 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.98■□□□□ 0.95
Tgfbr3O88393 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tgfbr3O88393 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tgfbr3O88393 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tgfbr3O88393 Gm7417-201ENSMUST00000192950 473 ntBASIC20.97■□□□□ 0.95
Tgfbr3O88393 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.97■□□□□ 0.95
Tgfbr3O88393 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tgfbr3O88393 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tgfbr3O88393 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tgfbr3O88393 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tgfbr3O88393 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.96■□□□□ 0.95
Tgfbr3O88393 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Tgfbr3O88393 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Tgfbr3O88393 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tgfbr3O88393 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tgfbr3O88393 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.95■□□□□ 0.94
Tgfbr3O88393 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tgfbr3O88393 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Tgfbr3O88393 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tgfbr3O88393 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tgfbr3O88393 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tgfbr3O88393 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tgfbr3O88393 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tgfbr3O88393 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tgfbr3O88393 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tgfbr3O88393 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Tgfbr3O88393 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tgfbr3O88393 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tgfbr3O88393 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tgfbr3O88393 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tgfbr3O88393 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tgfbr3O88393 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tgfbr3O88393 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tgfbr3O88393 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Tgfbr3O88393 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tgfbr3O88393 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Tgfbr3O88393 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tgfbr3O88393 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.92■□□□□ 0.94
Tgfbr3O88393 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tgfbr3O88393 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tgfbr3O88393 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tgfbr3O88393 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Tgfbr3O88393 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Tgfbr3O88393 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tgfbr3O88393 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tgfbr3O88393 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Tgfbr3O88393 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Tgfbr3O88393 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.9■□□□□ 0.94
Tgfbr3O88393 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms