Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pdlim3O70209 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.84■□□□□ 0.77
Pdlim3O70209 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim3O70209 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim3O70209 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.84■□□□□ 0.77
Pdlim3O70209 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim3O70209 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim3O70209 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pdlim3O70209 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim3O70209 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pdlim3O70209 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.82■□□□□ 0.76
Pdlim3O70209 Gm6821-201ENSMUST00000107540 542 ntBASIC19.82■□□□□ 0.76
Pdlim3O70209 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim3O70209 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.82■□□□□ 0.76
Pdlim3O70209 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pdlim3O70209 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim3O70209 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pdlim3O70209 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim3O70209 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pdlim3O70209 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim3O70209 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pdlim3O70209 Gm4799-201ENSMUST00000095396 657 ntBASIC19.81■□□□□ 0.76
Pdlim3O70209 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim3O70209 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim3O70209 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pdlim3O70209 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim3O70209 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.8■□□□□ 0.76
Pdlim3O70209 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pdlim3O70209 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pdlim3O70209 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.79■□□□□ 0.76
Pdlim3O70209 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim3O70209 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim3O70209 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim3O70209 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim3O70209 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim3O70209 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim3O70209 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pdlim3O70209 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim3O70209 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Pdlim3O70209 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim3O70209 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim3O70209 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.78■□□□□ 0.76
Pdlim3O70209 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.78■□□□□ 0.76
Pdlim3O70209 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim3O70209 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pdlim3O70209 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.77■□□□□ 0.76
Pdlim3O70209 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim3O70209 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim3O70209 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pdlim3O70209 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Pdlim3O70209 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.77■□□□□ 0.75
Pdlim3O70209 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim3O70209 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim3O70209 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim3O70209 Gm22567-201ENSMUST00000175542 342 ntBASIC19.76■□□□□ 0.75
Pdlim3O70209 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
Pdlim3O70209 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim3O70209 Gm9812-201ENSMUST00000061934 968 ntBASIC19.76■□□□□ 0.75
Pdlim3O70209 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim3O70209 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim3O70209 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pdlim3O70209 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.75■□□□□ 0.75
Pdlim3O70209 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim3O70209 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim3O70209 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.75■□□□□ 0.75
Pdlim3O70209 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pdlim3O70209 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim3O70209 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim3O70209 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pdlim3O70209 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim3O70209 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim3O70209 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pdlim3O70209 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim3O70209 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pdlim3O70209 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim3O70209 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Pdlim3O70209 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Pdlim3O70209 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.73■□□□□ 0.75
Pdlim3O70209 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim3O70209 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim3O70209 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim3O70209 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim3O70209 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pdlim3O70209 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pdlim3O70209 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pdlim3O70209 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pdlim3O70209 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.72■□□□□ 0.75
Pdlim3O70209 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.72■□□□□ 0.75
Pdlim3O70209 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pdlim3O70209 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim3O70209 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim3O70209 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim3O70209 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pdlim3O70209 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pdlim3O70209 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.71■□□□□ 0.75
Pdlim3O70209 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim3O70209 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Pdlim3O70209 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pdlim3O70209 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.7■□□□□ 0.74
Pdlim3O70209 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms