Protein–RNA interactions for Protein: O55225

Otog, Otogelin, mousemouse

Predictions only

Length 2,910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtogO55225 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.17■□□□□ 0.5
OtogO55225 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
OtogO55225 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.17■□□□□ 0.5
OtogO55225 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.16■□□□□ 0.5
OtogO55225 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
OtogO55225 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
OtogO55225 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
OtogO55225 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OtogO55225 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
OtogO55225 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
OtogO55225 Gm22238-201ENSMUST00000175222 88 ntBASIC18.15■□□□□ 0.5
OtogO55225 Gm7417-201ENSMUST00000192950 473 ntBASIC18.15■□□□□ 0.5
OtogO55225 Gm12922-201ENSMUST00000120626 809 ntBASIC18.14■□□□□ 0.49
OtogO55225 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
OtogO55225 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
OtogO55225 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.12■□□□□ 0.49
OtogO55225 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
OtogO55225 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.12■□□□□ 0.49
OtogO55225 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OtogO55225 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
OtogO55225 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OtogO55225 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OtogO55225 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OtogO55225 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.12■□□□□ 0.49
OtogO55225 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
OtogO55225 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OtogO55225 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
OtogO55225 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.1■□□□□ 0.49
OtogO55225 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.09■□□□□ 0.49
OtogO55225 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
OtogO55225 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.09■□□□□ 0.49
OtogO55225 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.09■□□□□ 0.49
OtogO55225 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtogO55225 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
OtogO55225 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
OtogO55225 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
OtogO55225 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.09■□□□□ 0.49
OtogO55225 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
OtogO55225 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.08■□□□□ 0.49
OtogO55225 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
OtogO55225 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
OtogO55225 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.08■□□□□ 0.48
OtogO55225 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.07■□□□□ 0.48
OtogO55225 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
OtogO55225 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
OtogO55225 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
OtogO55225 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
OtogO55225 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
OtogO55225 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
OtogO55225 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.07■□□□□ 0.48
OtogO55225 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
OtogO55225 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.06■□□□□ 0.48
OtogO55225 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
OtogO55225 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
OtogO55225 Gm27454-201ENSMUST00000185090 204 ntBASIC18.05■□□□□ 0.48
OtogO55225 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
OtogO55225 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
OtogO55225 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
OtogO55225 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.05■□□□□ 0.48
OtogO55225 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
OtogO55225 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.04■□□□□ 0.48
OtogO55225 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
OtogO55225 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
OtogO55225 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
OtogO55225 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OtogO55225 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.03■□□□□ 0.48
OtogO55225 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OtogO55225 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
OtogO55225 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.03■□□□□ 0.48
OtogO55225 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.03■□□□□ 0.48
OtogO55225 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.03■□□□□ 0.48
OtogO55225 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OtogO55225 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
OtogO55225 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
OtogO55225 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
OtogO55225 Gm40881-201ENSMUST00000223397 166 ntBASIC18.02■□□□□ 0.48
OtogO55225 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
OtogO55225 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
OtogO55225 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
OtogO55225 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.02■□□□□ 0.47
OtogO55225 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
OtogO55225 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OtogO55225 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OtogO55225 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.01■□□□□ 0.47
OtogO55225 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
OtogO55225 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.01■□□□□ 0.47
OtogO55225 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
OtogO55225 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18■□□□□ 0.47
OtogO55225 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18■□□□□ 0.47
OtogO55225 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18■□□□□ 0.47
OtogO55225 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18■□□□□ 0.47
OtogO55225 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
OtogO55225 Golgb1-201ENSMUST00000023534 498 ntBASIC17.99■□□□□ 0.47
OtogO55225 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
OtogO55225 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
OtogO55225 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
OtogO55225 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
OtogO55225 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
OtogO55225 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.99■□□□□ 0.47
OtogO55225 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms