Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Trdmt1O55055 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trdmt1O55055 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Trdmt1O55055 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
Trdmt1O55055 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trdmt1O55055 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.58■■□□□ 1.53
Trdmt1O55055 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.58■■□□□ 1.53
Trdmt1O55055 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
Trdmt1O55055 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Trdmt1O55055 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.57■■□□□ 1.52
Trdmt1O55055 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Trdmt1O55055 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trdmt1O55055 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.57■■□□□ 1.52
Trdmt1O55055 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trdmt1O55055 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Trdmt1O55055 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trdmt1O55055 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trdmt1O55055 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.56■■□□□ 1.52
Trdmt1O55055 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trdmt1O55055 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trdmt1O55055 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.55■■□□□ 1.52
Trdmt1O55055 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trdmt1O55055 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Trdmt1O55055 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.54■■□□□ 1.52
Trdmt1O55055 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.54■■□□□ 1.52
Trdmt1O55055 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.54■■□□□ 1.52
Trdmt1O55055 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trdmt1O55055 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Trdmt1O55055 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.53■■□□□ 1.52
Trdmt1O55055 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.53■■□□□ 1.52
Trdmt1O55055 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Trdmt1O55055 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.53■■□□□ 1.52
Trdmt1O55055 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.53■■□□□ 1.52
Trdmt1O55055 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.53■■□□□ 1.52
Trdmt1O55055 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trdmt1O55055 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Trdmt1O55055 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
Trdmt1O55055 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.52■■□□□ 1.52
Trdmt1O55055 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.52■■□□□ 1.52
Trdmt1O55055 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trdmt1O55055 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trdmt1O55055 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
Trdmt1O55055 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.51■■□□□ 1.51
Trdmt1O55055 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trdmt1O55055 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
Trdmt1O55055 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Trdmt1O55055 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trdmt1O55055 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.5■■□□□ 1.51
Trdmt1O55055 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Trdmt1O55055 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trdmt1O55055 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Trdmt1O55055 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trdmt1O55055 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Trdmt1O55055 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trdmt1O55055 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trdmt1O55055 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.49■■□□□ 1.51
Trdmt1O55055 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trdmt1O55055 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Trdmt1O55055 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trdmt1O55055 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trdmt1O55055 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trdmt1O55055 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trdmt1O55055 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Trdmt1O55055 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trdmt1O55055 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.47■■□□□ 1.51
Trdmt1O55055 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Trdmt1O55055 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
Trdmt1O55055 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trdmt1O55055 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.46■■□□□ 1.51
Trdmt1O55055 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trdmt1O55055 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trdmt1O55055 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.46■■□□□ 1.51
Trdmt1O55055 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trdmt1O55055 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Trdmt1O55055 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trdmt1O55055 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trdmt1O55055 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trdmt1O55055 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.45■■□□□ 1.5
Trdmt1O55055 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.45■■□□□ 1.5
Trdmt1O55055 Gm7417-201ENSMUST00000192950 473 ntBASIC24.45■■□□□ 1.5
Trdmt1O55055 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.45■■□□□ 1.5
Trdmt1O55055 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trdmt1O55055 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trdmt1O55055 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trdmt1O55055 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trdmt1O55055 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.44■■□□□ 1.5
Trdmt1O55055 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.43■■□□□ 1.5
Trdmt1O55055 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.43■■□□□ 1.5
Trdmt1O55055 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trdmt1O55055 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trdmt1O55055 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trdmt1O55055 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trdmt1O55055 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.42■■□□□ 1.5
Trdmt1O55055 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trdmt1O55055 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Trdmt1O55055 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trdmt1O55055 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trdmt1O55055 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trdmt1O55055 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Trdmt1O55055 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms