Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
FxnO35943 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.26■□□□□ 0.83
FxnO35943 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FxnO35943 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FxnO35943 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FxnO35943 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
FxnO35943 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FxnO35943 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FxnO35943 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.25■□□□□ 0.83
FxnO35943 Notumos-201ENSMUST00000151998 2659 ntBASIC20.25■□□□□ 0.83
FxnO35943 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FxnO35943 Gm44428-201ENSMUST00000204474 874 ntBASIC20.25■□□□□ 0.83
FxnO35943 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FxnO35943 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
FxnO35943 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FxnO35943 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FxnO35943 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FxnO35943 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FxnO35943 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FxnO35943 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FxnO35943 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.24■□□□□ 0.83
FxnO35943 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
FxnO35943 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FxnO35943 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
FxnO35943 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FxnO35943 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FxnO35943 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FxnO35943 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FxnO35943 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FxnO35943 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FxnO35943 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FxnO35943 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
FxnO35943 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.22■□□□□ 0.83
FxnO35943 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FxnO35943 Gm22567-201ENSMUST00000175542 342 ntBASIC20.22■□□□□ 0.83
FxnO35943 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FxnO35943 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FxnO35943 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FxnO35943 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FxnO35943 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
FxnO35943 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FxnO35943 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FxnO35943 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FxnO35943 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FxnO35943 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
FxnO35943 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FxnO35943 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FxnO35943 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FxnO35943 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FxnO35943 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FxnO35943 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FxnO35943 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
FxnO35943 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FxnO35943 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FxnO35943 Gm9806-201ENSMUST00000051080 552 ntBASIC20.19■□□□□ 0.82
FxnO35943 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FxnO35943 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FxnO35943 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FxnO35943 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.18■□□□□ 0.82
FxnO35943 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.18■□□□□ 0.82
FxnO35943 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FxnO35943 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
FxnO35943 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.18■□□□□ 0.82
FxnO35943 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FxnO35943 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
FxnO35943 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FxnO35943 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FxnO35943 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FxnO35943 Scarna2-201ENSMUST00000157560 414 ntBASIC20.17■□□□□ 0.82
FxnO35943 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
FxnO35943 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FxnO35943 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FxnO35943 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.16■□□□□ 0.82
FxnO35943 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FxnO35943 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FxnO35943 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FxnO35943 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FxnO35943 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.15■□□□□ 0.82
FxnO35943 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
FxnO35943 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FxnO35943 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
FxnO35943 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
FxnO35943 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FxnO35943 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FxnO35943 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FxnO35943 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.14■□□□□ 0.81
FxnO35943 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FxnO35943 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FxnO35943 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
FxnO35943 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
FxnO35943 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
FxnO35943 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
FxnO35943 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
FxnO35943 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.13■□□□□ 0.81
FxnO35943 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
FxnO35943 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.12■□□□□ 0.81
FxnO35943 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FxnO35943 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
FxnO35943 Gm11687-201ENSMUST00000118911 886 ntBASIC20.12■□□□□ 0.81
FxnO35943 Gm16437-201ENSMUST00000025669 507 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms