Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Nr1i3O35627 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Nr1i3O35627 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Nr1i3O35627 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.64■■□□□ 1.37
Nr1i3O35627 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nr1i3O35627 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nr1i3O35627 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nr1i3O35627 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Nr1i3O35627 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nr1i3O35627 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.63■■□□□ 1.37
Nr1i3O35627 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nr1i3O35627 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nr1i3O35627 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nr1i3O35627 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nr1i3O35627 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nr1i3O35627 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Nr1i3O35627 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nr1i3O35627 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nr1i3O35627 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.62■■□□□ 1.37
Nr1i3O35627 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.62■■□□□ 1.37
Nr1i3O35627 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nr1i3O35627 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nr1i3O35627 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nr1i3O35627 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Nr1i3O35627 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.61■■□□□ 1.37
Nr1i3O35627 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.61■■□□□ 1.37
Nr1i3O35627 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Nr1i3O35627 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Nr1i3O35627 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.6■■□□□ 1.37
Nr1i3O35627 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Nr1i3O35627 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Nr1i3O35627 Gm44428-201ENSMUST00000204474 874 ntBASIC23.6■■□□□ 1.37
Nr1i3O35627 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Nr1i3O35627 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nr1i3O35627 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nr1i3O35627 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Nr1i3O35627 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Nr1i3O35627 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nr1i3O35627 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nr1i3O35627 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nr1i3O35627 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nr1i3O35627 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Nr1i3O35627 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Nr1i3O35627 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.58■■□□□ 1.36
Nr1i3O35627 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Nr1i3O35627 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Nr1i3O35627 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.57■■□□□ 1.36
Nr1i3O35627 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Nr1i3O35627 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Nr1i3O35627 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Nr1i3O35627 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Nr1i3O35627 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Nr1i3O35627 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Nr1i3O35627 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Nr1i3O35627 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.56■■□□□ 1.36
Nr1i3O35627 Gm6311-201ENSMUST00000073790 878 ntBASIC23.56■■□□□ 1.36
Nr1i3O35627 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Nr1i3O35627 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Nr1i3O35627 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Nr1i3O35627 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.55■■□□□ 1.36
Nr1i3O35627 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.55■■□□□ 1.36
Nr1i3O35627 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Nr1i3O35627 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Nr1i3O35627 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Nr1i3O35627 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Nr1i3O35627 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.54■■□□□ 1.36
Nr1i3O35627 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.54■■□□□ 1.36
Nr1i3O35627 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Nr1i3O35627 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Nr1i3O35627 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Nr1i3O35627 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Nr1i3O35627 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.54■■□□□ 1.36
Nr1i3O35627 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Nr1i3O35627 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Nr1i3O35627 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.53■■□□□ 1.36
Nr1i3O35627 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Nr1i3O35627 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Nr1i3O35627 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Nr1i3O35627 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Nr1i3O35627 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Nr1i3O35627 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Nr1i3O35627 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Nr1i3O35627 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Nr1i3O35627 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Nr1i3O35627 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Nr1i3O35627 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Nr1i3O35627 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.52■■□□□ 1.36
Nr1i3O35627 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.52■■□□□ 1.36
Nr1i3O35627 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Nr1i3O35627 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Nr1i3O35627 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Nr1i3O35627 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Nr1i3O35627 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Nr1i3O35627 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.51■■□□□ 1.35
Nr1i3O35627 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Nr1i3O35627 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Nr1i3O35627 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Nr1i3O35627 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Nr1i3O35627 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Nr1i3O35627 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms