Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm11236J3QMS7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm11236J3QMS7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.34■■□□□ 1.33
Gm11236J3QMS7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Gm11236J3QMS7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Gm11236J3QMS7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm11236J3QMS7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm11236J3QMS7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Gm11236J3QMS7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Gm11236J3QMS7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm11236J3QMS7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm11236J3QMS7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Gm11236J3QMS7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.32
Gm11236J3QMS7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Gm11236J3QMS7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Gm11236J3QMS7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Gm11236J3QMS7 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.32■■□□□ 1.32
Gm11236J3QMS7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Gm11236J3QMS7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Gm11236J3QMS7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.3■■□□□ 1.32
Gm11236J3QMS7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Gm11236J3QMS7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Gm11236J3QMS7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm11236J3QMS7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm11236J3QMS7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm11236J3QMS7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.29■■□□□ 1.32
Gm11236J3QMS7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Gm11236J3QMS7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm11236J3QMS7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Gm11236J3QMS7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Gm11236J3QMS7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Gm11236J3QMS7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Gm11236J3QMS7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Gm11236J3QMS7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Gm11236J3QMS7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm11236J3QMS7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Gm11236J3QMS7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.27■■□□□ 1.32
Gm11236J3QMS7 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.27■■□□□ 1.32
Gm11236J3QMS7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.26■■□□□ 1.31
Gm11236J3QMS7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Gm11236J3QMS7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Gm11236J3QMS7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.26■■□□□ 1.31
Gm11236J3QMS7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm11236J3QMS7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm11236J3QMS7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm11236J3QMS7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.26■■□□□ 1.31
Gm11236J3QMS7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm11236J3QMS7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
Gm11236J3QMS7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Gm11236J3QMS7 Etf1-202ENSMUST00000180351 108 ntBASIC23.25■■□□□ 1.31
Gm11236J3QMS7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.25■■□□□ 1.31
Gm11236J3QMS7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm11236J3QMS7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm11236J3QMS7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm11236J3QMS7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm11236J3QMS7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm11236J3QMS7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm11236J3QMS7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm11236J3QMS7 Gm15039-201ENSMUST00000118914 875 ntBASIC23.23■■□□□ 1.31
Gm11236J3QMS7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Gm11236J3QMS7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.23■■□□□ 1.31
Gm11236J3QMS7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.23■■□□□ 1.31
Gm11236J3QMS7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Gm11236J3QMS7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm11236J3QMS7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Gm11236J3QMS7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm11236J3QMS7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm11236J3QMS7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm11236J3QMS7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm11236J3QMS7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm11236J3QMS7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Gm11236J3QMS7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.21■■□□□ 1.31
Gm11236J3QMS7 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.21■■□□□ 1.31
Gm11236J3QMS7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Gm11236J3QMS7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.2■■□□□ 1.3
Gm11236J3QMS7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Gm11236J3QMS7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Gm11236J3QMS7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Gm11236J3QMS7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gm11236J3QMS7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gm11236J3QMS7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.19■■□□□ 1.3
Gm11236J3QMS7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Gm11236J3QMS7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Gm11236J3QMS7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm11236J3QMS7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.18■■□□□ 1.3
Gm11236J3QMS7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm11236J3QMS7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.18■■□□□ 1.3
Gm11236J3QMS7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm11236J3QMS7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm11236J3QMS7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm11236J3QMS7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm11236J3QMS7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.17■■□□□ 1.3
Gm11236J3QMS7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm11236J3QMS7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.16■■□□□ 1.3
Gm11236J3QMS7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Gm11236J3QMS7 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.16■■□□□ 1.3
Gm11236J3QMS7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Gm11236J3QMS7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Gm11236J3QMS7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Gm11236J3QMS7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms