Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Tubgcp6G5E8P0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC31.47■■■□□ 2.63
Tubgcp6G5E8P0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Tubgcp6G5E8P0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Tubgcp6G5E8P0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Tubgcp6G5E8P0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Tubgcp6G5E8P0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Tubgcp6G5E8P0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC31.45■■■□□ 2.63
Tubgcp6G5E8P0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tubgcp6G5E8P0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tubgcp6G5E8P0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
Tubgcp6G5E8P0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Tubgcp6G5E8P0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Tubgcp6G5E8P0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
Tubgcp6G5E8P0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Tubgcp6G5E8P0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC31.4■■■□□ 2.62
Tubgcp6G5E8P0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Tubgcp6G5E8P0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Tubgcp6G5E8P0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC31.39■■■□□ 2.62
Tubgcp6G5E8P0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC31.39■■■□□ 2.62
Tubgcp6G5E8P0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Tubgcp6G5E8P0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC31.38■■■□□ 2.61
Tubgcp6G5E8P0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Tubgcp6G5E8P0 Slc35b2-207ENSMUST00000226086 850 ntBASIC31.38■■■□□ 2.61
Tubgcp6G5E8P0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tubgcp6G5E8P0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tubgcp6G5E8P0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
Tubgcp6G5E8P0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Tubgcp6G5E8P0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tubgcp6G5E8P0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Tubgcp6G5E8P0 Gm9847-201ENSMUST00000052528 599 ntBASIC31.37■■■□□ 2.61
Tubgcp6G5E8P0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tubgcp6G5E8P0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tubgcp6G5E8P0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Tubgcp6G5E8P0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC31.36■■■□□ 2.61
Tubgcp6G5E8P0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tubgcp6G5E8P0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tubgcp6G5E8P0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Tubgcp6G5E8P0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Tubgcp6G5E8P0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Tubgcp6G5E8P0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Tubgcp6G5E8P0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Tubgcp6G5E8P0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Tubgcp6G5E8P0 Gm22238-201ENSMUST00000175222 88 ntBASIC31.33■■■□□ 2.61
Tubgcp6G5E8P0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.61
Tubgcp6G5E8P0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
Tubgcp6G5E8P0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Tubgcp6G5E8P0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Tubgcp6G5E8P0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Tubgcp6G5E8P0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tubgcp6G5E8P0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tubgcp6G5E8P0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC31.31■■■□□ 2.6
Tubgcp6G5E8P0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Tubgcp6G5E8P0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tubgcp6G5E8P0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tubgcp6G5E8P0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
Tubgcp6G5E8P0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Tubgcp6G5E8P0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Tubgcp6G5E8P0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Tubgcp6G5E8P0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Tubgcp6G5E8P0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Tubgcp6G5E8P0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Tubgcp6G5E8P0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Tubgcp6G5E8P0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tubgcp6G5E8P0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tubgcp6G5E8P0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tubgcp6G5E8P0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tubgcp6G5E8P0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tubgcp6G5E8P0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC31.28■■■□□ 2.6
Tubgcp6G5E8P0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Tubgcp6G5E8P0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC31.28■■■□□ 2.6
Tubgcp6G5E8P0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tubgcp6G5E8P0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Tubgcp6G5E8P0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC31.27■■■□□ 2.6
Tubgcp6G5E8P0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tubgcp6G5E8P0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tubgcp6G5E8P0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC31.27■■■□□ 2.6
Tubgcp6G5E8P0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
Tubgcp6G5E8P0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Tubgcp6G5E8P0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Tubgcp6G5E8P0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Tubgcp6G5E8P0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Tubgcp6G5E8P0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Tubgcp6G5E8P0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Tubgcp6G5E8P0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
Tubgcp6G5E8P0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC31.22■■■□□ 2.59
Tubgcp6G5E8P0 Gm7417-201ENSMUST00000192950 473 ntBASIC31.22■■■□□ 2.59
Tubgcp6G5E8P0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Tubgcp6G5E8P0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Tubgcp6G5E8P0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
Tubgcp6G5E8P0 Gm27454-201ENSMUST00000185090 204 ntBASIC31.22■■■□□ 2.59
Tubgcp6G5E8P0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tubgcp6G5E8P0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tubgcp6G5E8P0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC31.2■■■□□ 2.59
Tubgcp6G5E8P0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
Tubgcp6G5E8P0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Tubgcp6G5E8P0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Tubgcp6G5E8P0 Appbp2os-202ENSMUST00000206972 447 ntBASIC31.2■■■□□ 2.58
Tubgcp6G5E8P0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Tubgcp6G5E8P0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms