Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
NpcdF8VQB8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
NpcdF8VQB8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
NpcdF8VQB8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
NpcdF8VQB8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
NpcdF8VQB8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NpcdF8VQB8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
NpcdF8VQB8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
NpcdF8VQB8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
NpcdF8VQB8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC26.63■■□□□ 1.85
NpcdF8VQB8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
NpcdF8VQB8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.63■■□□□ 1.85
NpcdF8VQB8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
NpcdF8VQB8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.63■■□□□ 1.85
NpcdF8VQB8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
NpcdF8VQB8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
NpcdF8VQB8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
NpcdF8VQB8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.62■■□□□ 1.85
NpcdF8VQB8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
NpcdF8VQB8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.62■■□□□ 1.85
NpcdF8VQB8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
NpcdF8VQB8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.62■■□□□ 1.85
NpcdF8VQB8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NpcdF8VQB8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NpcdF8VQB8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NpcdF8VQB8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NpcdF8VQB8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NpcdF8VQB8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NpcdF8VQB8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NpcdF8VQB8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NpcdF8VQB8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.58■■□□□ 1.85
NpcdF8VQB8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC26.58■■□□□ 1.85
NpcdF8VQB8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC26.58■■□□□ 1.85
NpcdF8VQB8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NpcdF8VQB8 Gm40881-201ENSMUST00000223397 166 ntBASIC26.57■■□□□ 1.84
NpcdF8VQB8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NpcdF8VQB8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC26.56■■□□□ 1.84
NpcdF8VQB8 AC140930.3-201ENSMUST00000222935 274 ntBASIC26.56■■□□□ 1.84
NpcdF8VQB8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NpcdF8VQB8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
NpcdF8VQB8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.55■■□□□ 1.84
NpcdF8VQB8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NpcdF8VQB8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NpcdF8VQB8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NpcdF8VQB8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NpcdF8VQB8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NpcdF8VQB8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.54■■□□□ 1.84
NpcdF8VQB8 Gm27454-201ENSMUST00000185090 204 ntBASIC26.54■■□□□ 1.84
NpcdF8VQB8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
NpcdF8VQB8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.53■■□□□ 1.84
NpcdF8VQB8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NpcdF8VQB8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NpcdF8VQB8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NpcdF8VQB8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NpcdF8VQB8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NpcdF8VQB8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
NpcdF8VQB8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC26.51■■□□□ 1.83
NpcdF8VQB8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NpcdF8VQB8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NpcdF8VQB8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC26.5■■□□□ 1.83
NpcdF8VQB8 Gm8495-201ENSMUST00000188740 694 ntBASIC26.5■■□□□ 1.83
NpcdF8VQB8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NpcdF8VQB8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NpcdF8VQB8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NpcdF8VQB8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NpcdF8VQB8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NpcdF8VQB8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NpcdF8VQB8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NpcdF8VQB8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
NpcdF8VQB8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NpcdF8VQB8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NpcdF8VQB8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
NpcdF8VQB8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NpcdF8VQB8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
NpcdF8VQB8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NpcdF8VQB8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.47■■□□□ 1.83
NpcdF8VQB8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NpcdF8VQB8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NpcdF8VQB8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NpcdF8VQB8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC26.47■■□□□ 1.83
NpcdF8VQB8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
NpcdF8VQB8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NpcdF8VQB8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NpcdF8VQB8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NpcdF8VQB8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
NpcdF8VQB8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.46■■□□□ 1.83
NpcdF8VQB8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NpcdF8VQB8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NpcdF8VQB8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
NpcdF8VQB8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.45■■□□□ 1.83
NpcdF8VQB8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
NpcdF8VQB8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC26.45■■□□□ 1.82
NpcdF8VQB8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC26.45■■□□□ 1.82
NpcdF8VQB8 Gm45417-201ENSMUST00000209533 758 ntBASIC26.45■■□□□ 1.82
NpcdF8VQB8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
NpcdF8VQB8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC26.45■■□□□ 1.82
NpcdF8VQB8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NpcdF8VQB8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
NpcdF8VQB8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NpcdF8VQB8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms