Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.06■■□□□ 1.28
Ccdc188F6WEU2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc188F6WEU2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc188F6WEU2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
Ccdc188F6WEU2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc188F6WEU2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Ccdc188F6WEU2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc188F6WEU2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc188F6WEU2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc188F6WEU2 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.05■■□□□ 1.28
Ccdc188F6WEU2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Ccdc188F6WEU2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.04■■□□□ 1.28
Ccdc188F6WEU2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ccdc188F6WEU2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ccdc188F6WEU2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc188F6WEU2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc188F6WEU2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.03■■□□□ 1.28
Ccdc188F6WEU2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc188F6WEU2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc188F6WEU2 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.02■■□□□ 1.28
Ccdc188F6WEU2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.02■■□□□ 1.28
Ccdc188F6WEU2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc188F6WEU2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc188F6WEU2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc188F6WEU2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.01■■□□□ 1.27
Ccdc188F6WEU2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc188F6WEU2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc188F6WEU2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc188F6WEU2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc188F6WEU2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ccdc188F6WEU2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
Ccdc188F6WEU2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc188F6WEU2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc188F6WEU2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Ccdc188F6WEU2 Golgb1-201ENSMUST00000023534 498 ntBASIC22.99■■□□□ 1.27
Ccdc188F6WEU2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc188F6WEU2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc188F6WEU2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc188F6WEU2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc188F6WEU2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Ccdc188F6WEU2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc188F6WEU2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc188F6WEU2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc188F6WEU2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.96■■□□□ 1.27
Ccdc188F6WEU2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Ccdc188F6WEU2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc188F6WEU2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.96■■□□□ 1.27
Ccdc188F6WEU2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Ccdc188F6WEU2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.95■■□□□ 1.26
Ccdc188F6WEU2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ccdc188F6WEU2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ccdc188F6WEU2 Gm27011-201ENSMUST00000182352 972 ntBASIC22.94■■□□□ 1.26
Ccdc188F6WEU2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ccdc188F6WEU2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ccdc188F6WEU2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ccdc188F6WEU2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.93■■□□□ 1.26
Ccdc188F6WEU2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.93■■□□□ 1.26
Ccdc188F6WEU2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ccdc188F6WEU2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ccdc188F6WEU2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Ccdc188F6WEU2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc188F6WEU2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.92■■□□□ 1.26
Ccdc188F6WEU2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc188F6WEU2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc188F6WEU2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ccdc188F6WEU2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.91■■□□□ 1.26
Ccdc188F6WEU2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.91■■□□□ 1.26
Ccdc188F6WEU2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ccdc188F6WEU2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ccdc188F6WEU2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ccdc188F6WEU2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ccdc188F6WEU2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ccdc188F6WEU2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.9■■□□□ 1.26
Ccdc188F6WEU2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ccdc188F6WEU2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Ccdc188F6WEU2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Ccdc188F6WEU2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ccdc188F6WEU2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc188F6WEU2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.89■■□□□ 1.25
Ccdc188F6WEU2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ccdc188F6WEU2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc188F6WEU2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.88■■□□□ 1.25
Ccdc188F6WEU2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.88■■□□□ 1.25
Ccdc188F6WEU2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc188F6WEU2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc188F6WEU2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc188F6WEU2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc188F6WEU2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ccdc188F6WEU2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.87■■□□□ 1.25
Ccdc188F6WEU2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc188F6WEU2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ccdc188F6WEU2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc188F6WEU2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc188F6WEU2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.86■■□□□ 1.25
Ccdc188F6WEU2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc188F6WEU2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Ccdc188F6WEU2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ccdc188F6WEU2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.86■■□□□ 1.25
Ccdc188F6WEU2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc188F6WEU2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.85■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms