Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dchs1E9PVD3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Dchs1E9PVD3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dchs1E9PVD3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.82■□□□□ 0.76
Dchs1E9PVD3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.82■□□□□ 0.76
Dchs1E9PVD3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Dchs1E9PVD3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.81■□□□□ 0.76
Dchs1E9PVD3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Dchs1E9PVD3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Dchs1E9PVD3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Dchs1E9PVD3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.81■□□□□ 0.76
Dchs1E9PVD3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Dchs1E9PVD3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.8■□□□□ 0.76
Dchs1E9PVD3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Dchs1E9PVD3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dchs1E9PVD3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dchs1E9PVD3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dchs1E9PVD3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.79■□□□□ 0.76
Dchs1E9PVD3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dchs1E9PVD3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dchs1E9PVD3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dchs1E9PVD3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Dchs1E9PVD3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Dchs1E9PVD3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dchs1E9PVD3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Dchs1E9PVD3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dchs1E9PVD3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dchs1E9PVD3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Dchs1E9PVD3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Dchs1E9PVD3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dchs1E9PVD3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.76■□□□□ 0.75
Dchs1E9PVD3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Dchs1E9PVD3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dchs1E9PVD3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dchs1E9PVD3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dchs1E9PVD3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dchs1E9PVD3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dchs1E9PVD3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Dchs1E9PVD3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Dchs1E9PVD3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.75■□□□□ 0.75
Dchs1E9PVD3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.74■□□□□ 0.75
Dchs1E9PVD3 Gm9847-201ENSMUST00000052528 599 ntBASIC19.74■□□□□ 0.75
Dchs1E9PVD3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dchs1E9PVD3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Dchs1E9PVD3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Dchs1E9PVD3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dchs1E9PVD3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dchs1E9PVD3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Dchs1E9PVD3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dchs1E9PVD3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dchs1E9PVD3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dchs1E9PVD3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Dchs1E9PVD3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dchs1E9PVD3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Dchs1E9PVD3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Dchs1E9PVD3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.72■□□□□ 0.75
Dchs1E9PVD3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Dchs1E9PVD3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dchs1E9PVD3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dchs1E9PVD3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dchs1E9PVD3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Dchs1E9PVD3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dchs1E9PVD3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Dchs1E9PVD3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dchs1E9PVD3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.7■□□□□ 0.74
Dchs1E9PVD3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Dchs1E9PVD3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Dchs1E9PVD3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Dchs1E9PVD3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Dchs1E9PVD3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dchs1E9PVD3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dchs1E9PVD3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.69■□□□□ 0.74
Dchs1E9PVD3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dchs1E9PVD3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Dchs1E9PVD3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.69■□□□□ 0.74
Dchs1E9PVD3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.68■□□□□ 0.74
Dchs1E9PVD3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Dchs1E9PVD3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Dchs1E9PVD3 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.68■□□□□ 0.74
Dchs1E9PVD3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Dchs1E9PVD3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Dchs1E9PVD3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Dchs1E9PVD3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.67■□□□□ 0.74
Dchs1E9PVD3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Dchs1E9PVD3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dchs1E9PVD3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Dchs1E9PVD3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Dchs1E9PVD3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Dchs1E9PVD3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Dchs1E9PVD3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Dchs1E9PVD3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dchs1E9PVD3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.65■□□□□ 0.74
Dchs1E9PVD3 Gm12922-201ENSMUST00000120626 809 ntBASIC19.65■□□□□ 0.74
Dchs1E9PVD3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Dchs1E9PVD3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Dchs1E9PVD3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Dchs1E9PVD3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Dchs1E9PVD3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Dchs1E9PVD3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Dchs1E9PVD3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms