Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
IsxA1A546 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
IsxA1A546 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IsxA1A546 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
IsxA1A546 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
IsxA1A546 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IsxA1A546 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
IsxA1A546 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IsxA1A546 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IsxA1A546 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.35■□□□□ 0.85
IsxA1A546 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IsxA1A546 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IsxA1A546 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
IsxA1A546 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IsxA1A546 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
IsxA1A546 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IsxA1A546 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IsxA1A546 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
IsxA1A546 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IsxA1A546 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IsxA1A546 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IsxA1A546 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IsxA1A546 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IsxA1A546 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
IsxA1A546 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
IsxA1A546 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.33■□□□□ 0.85
IsxA1A546 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IsxA1A546 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.33■□□□□ 0.84
IsxA1A546 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IsxA1A546 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IsxA1A546 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
IsxA1A546 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
IsxA1A546 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IsxA1A546 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IsxA1A546 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IsxA1A546 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
IsxA1A546 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.31■□□□□ 0.84
IsxA1A546 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
IsxA1A546 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IsxA1A546 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
IsxA1A546 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.31■□□□□ 0.84
IsxA1A546 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
IsxA1A546 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.3■□□□□ 0.84
IsxA1A546 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
IsxA1A546 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.3■□□□□ 0.84
IsxA1A546 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IsxA1A546 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IsxA1A546 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
IsxA1A546 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IsxA1A546 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IsxA1A546 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
IsxA1A546 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.28■□□□□ 0.84
IsxA1A546 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.28■□□□□ 0.84
IsxA1A546 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IsxA1A546 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IsxA1A546 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
IsxA1A546 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
IsxA1A546 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.28■□□□□ 0.84
IsxA1A546 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
IsxA1A546 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IsxA1A546 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IsxA1A546 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.27■□□□□ 0.84
IsxA1A546 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.27■□□□□ 0.84
IsxA1A546 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IsxA1A546 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IsxA1A546 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IsxA1A546 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IsxA1A546 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IsxA1A546 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IsxA1A546 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.25■□□□□ 0.83
IsxA1A546 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IsxA1A546 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IsxA1A546 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IsxA1A546 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IsxA1A546 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
IsxA1A546 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.25■□□□□ 0.83
IsxA1A546 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IsxA1A546 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IsxA1A546 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IsxA1A546 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IsxA1A546 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
IsxA1A546 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IsxA1A546 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
IsxA1A546 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IsxA1A546 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.24■□□□□ 0.83
IsxA1A546 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IsxA1A546 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IsxA1A546 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.22■□□□□ 0.83
IsxA1A546 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IsxA1A546 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IsxA1A546 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
IsxA1A546 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IsxA1A546 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IsxA1A546 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
IsxA1A546 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IsxA1A546 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
IsxA1A546 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IsxA1A546 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IsxA1A546 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IsxA1A546 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 181.3 ms