Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC14.42□□□□□ -0.1
Igkv1-88A0A140T8N1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv1-88A0A140T8N1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv1-88A0A140T8N1 Gm37136-201ENSMUST00000194368 194 ntBASIC14.42□□□□□ -0.1
Igkv1-88A0A140T8N1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv1-88A0A140T8N1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv1-88A0A140T8N1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Igkv1-88A0A140T8N1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv1-88A0A140T8N1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv1-88A0A140T8N1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv1-88A0A140T8N1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv1-88A0A140T8N1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Igkv1-88A0A140T8N1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv1-88A0A140T8N1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv1-88A0A140T8N1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv1-88A0A140T8N1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv1-88A0A140T8N1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv1-88A0A140T8N1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Igkv1-88A0A140T8N1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Igkv1-88A0A140T8N1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv1-88A0A140T8N1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv1-88A0A140T8N1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC14.39□□□□□ -0.11
Igkv1-88A0A140T8N1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv1-88A0A140T8N1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv1-88A0A140T8N1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv1-88A0A140T8N1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv1-88A0A140T8N1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv1-88A0A140T8N1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv1-88A0A140T8N1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv1-88A0A140T8N1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv1-88A0A140T8N1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv1-88A0A140T8N1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv1-88A0A140T8N1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv1-88A0A140T8N1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Igkv1-88A0A140T8N1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.37□□□□□ -0.11
Igkv1-88A0A140T8N1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv1-88A0A140T8N1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Igkv1-88A0A140T8N1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv1-88A0A140T8N1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv1-88A0A140T8N1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv1-88A0A140T8N1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv1-88A0A140T8N1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv1-88A0A140T8N1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv1-88A0A140T8N1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Igkv1-88A0A140T8N1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.36□□□□□ -0.11
Igkv1-88A0A140T8N1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC14.36□□□□□ -0.11
Igkv1-88A0A140T8N1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Igkv1-88A0A140T8N1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv1-88A0A140T8N1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.35□□□□□ -0.11
Igkv1-88A0A140T8N1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.35□□□□□ -0.11
Igkv1-88A0A140T8N1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv1-88A0A140T8N1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv1-88A0A140T8N1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Igkv1-88A0A140T8N1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Gm6821-201ENSMUST00000107540 542 ntBASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Gm9939-201ENSMUST00000067161 1154 ntBASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv1-88A0A140T8N1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Igkv1-88A0A140T8N1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv1-88A0A140T8N1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Igkv1-88A0A140T8N1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv1-88A0A140T8N1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv1-88A0A140T8N1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv1-88A0A140T8N1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv1-88A0A140T8N1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.32□□□□□ -0.12
Igkv1-88A0A140T8N1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv1-88A0A140T8N1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv1-88A0A140T8N1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv1-88A0A140T8N1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv1-88A0A140T8N1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv1-88A0A140T8N1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv1-88A0A140T8N1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Igkv1-88A0A140T8N1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.3□□□□□ -0.12
Igkv1-88A0A140T8N1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv1-88A0A140T8N1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.3□□□□□ -0.12
Igkv1-88A0A140T8N1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Igkv1-88A0A140T8N1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv1-88A0A140T8N1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.3□□□□□ -0.12
Igkv1-88A0A140T8N1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv1-88A0A140T8N1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv1-88A0A140T8N1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC14.29□□□□□ -0.12
Igkv1-88A0A140T8N1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 286 ms