Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav7-5A0A0G2JFX6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-5A0A0G2JFX6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-5A0A0G2JFX6 Cap2-205ENSMUST00000225824 1634 ntBASIC17.16■□□□□ 0.34
Trav7-5A0A0G2JFX6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-5A0A0G2JFX6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-5A0A0G2JFX6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav7-5A0A0G2JFX6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7-5A0A0G2JFX6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 Gm27502-201ENSMUST00000183495 199 ntBASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7-5A0A0G2JFX6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav7-5A0A0G2JFX6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-5A0A0G2JFX6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-5A0A0G2JFX6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-5A0A0G2JFX6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-5A0A0G2JFX6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-5A0A0G2JFX6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-5A0A0G2JFX6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7-5A0A0G2JFX6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7-5A0A0G2JFX6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-5A0A0G2JFX6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-5A0A0G2JFX6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-5A0A0G2JFX6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav7-5A0A0G2JFX6 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.12■□□□□ 0.33
Trav7-5A0A0G2JFX6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7-5A0A0G2JFX6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav7-5A0A0G2JFX6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-5A0A0G2JFX6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav7-5A0A0G2JFX6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7-5A0A0G2JFX6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav7-5A0A0G2JFX6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav7-5A0A0G2JFX6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7-5A0A0G2JFX6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav7-5A0A0G2JFX6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav7-5A0A0G2JFX6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Trav7-5A0A0G2JFX6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-5A0A0G2JFX6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7-5A0A0G2JFX6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav7-5A0A0G2JFX6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trav7-5A0A0G2JFX6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Trav7-5A0A0G2JFX6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-5A0A0G2JFX6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-5A0A0G2JFX6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-5A0A0G2JFX6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Trav7-5A0A0G2JFX6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-5A0A0G2JFX6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7-5A0A0G2JFX6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-5A0A0G2JFX6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trav7-5A0A0G2JFX6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav7-5A0A0G2JFX6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Trav7-5A0A0G2JFX6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7-5A0A0G2JFX6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.07■□□□□ 0.32
Trav7-5A0A0G2JFX6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-5A0A0G2JFX6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-5A0A0G2JFX6 Gm10420-201ENSMUST00000121713 882 ntBASIC17.06■□□□□ 0.32
Trav7-5A0A0G2JFX6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-5A0A0G2JFX6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-5A0A0G2JFX6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7-5A0A0G2JFX6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Trav7-5A0A0G2JFX6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-5A0A0G2JFX6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-5A0A0G2JFX6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7-5A0A0G2JFX6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav7-5A0A0G2JFX6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7-5A0A0G2JFX6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7-5A0A0G2JFX6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7-5A0A0G2JFX6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.04■□□□□ 0.32
Trav7-5A0A0G2JFX6 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.04■□□□□ 0.32
Trav7-5A0A0G2JFX6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.04■□□□□ 0.32
Trav7-5A0A0G2JFX6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav7-5A0A0G2JFX6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7-5A0A0G2JFX6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7-5A0A0G2JFX6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav7-5A0A0G2JFX6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7-5A0A0G2JFX6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trav7-5A0A0G2JFX6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7-5A0A0G2JFX6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav7-5A0A0G2JFX6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms