Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv13-3A0A0B4J1H2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.11■□□□□ 0.33
Trbv13-3A0A0B4J1H2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.11■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv13-3A0A0B4J1H2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.09■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trbv13-3A0A0B4J1H2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.09■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv13-3A0A0B4J1H2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.08■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.08■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Trbv13-3A0A0B4J1H2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.06■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.05■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv13-3A0A0B4J1H2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv13-3A0A0B4J1H2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.02■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Gm37136-201ENSMUST00000194368 194 ntBASIC17.01■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms