Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav13-4-dv7A0A075B6C2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav13-4-dv7A0A075B6C2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13-4-dv7A0A075B6C2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13-4-dv7A0A075B6C2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13-4-dv7A0A075B6C2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13-4-dv7A0A075B6C2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.03■□□□□ -0
Trav13-4-dv7A0A075B6C2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13-4-dv7A0A075B6C2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13-4-dv7A0A075B6C2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.03■□□□□ -0
Trav13-4-dv7A0A075B6C2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13-4-dv7A0A075B6C2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.02■□□□□ -0
Trav13-4-dv7A0A075B6C2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.02■□□□□ -0
Trav13-4-dv7A0A075B6C2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13-4-dv7A0A075B6C2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.02■□□□□ -0
Trav13-4-dv7A0A075B6C2 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.02■□□□□ -0
Trav13-4-dv7A0A075B6C2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.02■□□□□ -0
Trav13-4-dv7A0A075B6C2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13-4-dv7A0A075B6C2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13-4-dv7A0A075B6C2 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.02■□□□□ -0
Trav13-4-dv7A0A075B6C2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Gm6821-201ENSMUST00000107540 542 ntBASIC14.99□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.98□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13-4-dv7A0A075B6C2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13-4-dv7A0A075B6C2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms