Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn8aQ9WTU3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn8aQ9WTU3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn8aQ9WTU3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Gm12341-201ENSMUST00000119724 503 ntBASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Gm12138-201ENSMUST00000122180 951 ntBASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Gm18905-201ENSMUST00000205454 928 ntBASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn8aQ9WTU3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms