Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx6Q9R1R0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx6Q9R1R0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lhx6Q9R1R0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lhx6Q9R1R0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Gm11877-201ENSMUST00000118921 852 ntBASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Ap1g1-206ENSMUST00000179104 1096 ntBASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 App-207ENSMUST00000227737 2827 ntBASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lhx6Q9R1R0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Mir1247-201ENSMUST00000116706 82 ntBASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Gm25295-201ENSMUST00000122794 306 ntBASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Gm18737-201ENSMUST00000173594 937 ntBASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lhx6Q9R1R0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Lhx6Q9R1R0 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx6Q9R1R0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lhx6Q9R1R0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms